Gene Information

Name : EBL_c34950 (EBL_c34950)
Accession : YP_006321061.1
Strain : Escherichia blattae DSM 4481
Genome accession: NC_017910
Putative virulence/resistance : Virulence
Product : iron transport system membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3616495 - 3617361 bp
Length : 867 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCGTGCTGCTTGAGCCGTTTACCTACCAGTATATGCGCAACGCGATGTGGGTCTCCGCCATGGTGGGGGGGCTGTG
CGCGTTTCTTTCCTGCTACCTGATGCTAAAGGGCTGGTCCCTGATTGGGGATGCCCTGTCCCACGCGATTGTCCCCGGCG
TGGCCGGGGCCTATATGCTCGGCCTGCCTTTTGCGCTGGGGGCGTTTTTATCCGGCGGCCTGGCGGCGGGCAGTATGCTG
TTTCTCAACCAGCGCACCCGGCTGAAAGAGGATGTGATTATCGGGCTGATATTTTCGTCGTTTTTCGGGCTGGGGCTGTT
TATGGTGTCGCTGAATCCGGCTGCCGTGAATATCCAGACCATTGTGCTGGGCAATGTGCTGGCGATTGCTCCGCAGGATA
TTGTGCAACTGGGGATTATCGGCGGCGTTTCAGCCCTGGCGCTGGCACTGAAGTGGAAAGATCTGCTGGTGGTCTTTTTT
GATGAGCATCATGCCCGGGCTGCGGGGTTGTGCCCGGCCCGCCTGAAGCTGCTGTTTTTTACGCTGCTGGCCCTCTCCAC
GGTGGCGGCACTGCAAACCGTGGGGGCGTTTCTGGTTATCTCGCTGGTGGTGACCCCGGGGGCCACCGCATGGCTGCTGA
CCGATCGCTTCCCGCGCCTGCTGGGGATAGCGGTCGCGATAGGCAGTATCACCAGCTTCCTCGGCGCCTGGCTCAGCTAT
TACCTGGATGGTGCCACCGGCGGGATTATCGTTGTCGCCCAGACCCTGCTGTTTTTGCTGGTGTTTATCTTTGCCCCGGT
TCACGGCCTGCTGGCCAGCCGCCGCCGGGCCAGAGCAGGAGCGACCCATGCTGACCCTGCTGCTTGA

Protein sequence : 
MSVLLEPFTYQYMRNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHAIVPGVAGAYMLGLPFALGAFLSGGLAAGSML
FLNQRTRLKEDVIIGLIFSSFFGLGLFMVSLNPAAVNIQTIVLGNVLAIAPQDIVQLGIIGGVSALALALKWKDLLVVFF
DEHHARAAGLCPARLKLLFFTLLALSTVAALQTVGAFLVISLVVTPGATAWLLTDRFPRLLGIAVAIGSITSFLGAWLSY
YLDGATGGIIVVAQTLLFLLVFIFAPVHGLLASRRRARAGATHADPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 2e-67 86
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-67 86
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-67 86
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-67 86
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-67 86
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-33 46
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-33 46
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-33 46
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 1e-32 45
sitD NP_461785.1 permease Virulence SPI-1 Protein 1e-32 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EBL_c34950 YP_006321061.1 iron transport system membrane protein BAC0351 Protein 1e-67 86
EBL_c34950 YP_006321061.1 iron transport system membrane protein BAC0441 Protein 5e-52 67
EBL_c34950 YP_006321061.1 iron transport system membrane protein BAC0352 Protein 6e-33 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EBL_c34950 YP_006321061.1 iron transport system membrane protein VFG0527 Protein 1e-67 86
EBL_c34950 YP_006321061.1 iron transport system membrane protein VFG0528 Protein 5e-33 45