Gene Information

Name : EBL_c34940 (EBL_c34940)
Accession : YP_006321060.1
Strain : Escherichia blattae DSM 4481
Genome accession: NC_017910
Putative virulence/resistance : Virulence
Product : iron transport system membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3615687 - 3616514 bp
Length : 828 bp
Strand : -
Note : -

DNA sequence : 
ATGCTGACCCTGCTGCTTGAGCCCTTCCAGTTCGGGTTTATTAACCAGGCACTGCTGATGGTGCTGGCGATCGCGCTGCC
CTGTGCGTTGCTTTCGGTGTTTCTGGTGCTGAACGGCTGGGCGCTACTGGGGGATGCCATGAGCCACGCGGTCTTCCCGG
GGATTGTGATGGCGTGGATGCTGGGGCTGCCGCTCAGCGCCGGGGCATTTGTGGCCGGGCTGTTTTGCGCTGTGGCCAGC
GGCTGGCTGAAGGATAACAGCCGCATTAAACAGGACACCCTGATGGGGATCGTCTTTTCCGGGATGTTTGCCGCCGGGCT
GGTGCTGTATATCGCGCTGAAGCCGGAGGTCCATCTGGATCATATTCTGTTTGGCGATCTGCTGGGGATCCTGGCGGAAG
ATATCCTCCCGACGCTGGTCATCACTCTTGGGATCATCATGATCCTTGCCCTCAAATGGCGGGATTTTTTACTGTTCAGT
TTTGATGCGCAGCAGGCCCGGGCCTGCGGCCTGGCGATCGGCTGGCTGCACTACGGCCTGCTGGCGATGGTGGCGCTGAC
GATTGTCGCAAGCCTGAAAGCGGTGGGGATTATTTTATCGGTCTCGCTGCTGATTGCCCCGGGGGCGATTGCGCTGTTGC
TGGCCCGGCGTTTTTCCCGGGCGCTGCTTCTGGCGACAGGTGTGGCGGCGCTGGTCCCGGTGAGCGGTGTCTATTTGTCG
TTTTTTATCGACAGCGCCCCGGCACCCACCATTGTGGTGCTGTTTGCGCTGGTGTTCTGCGCGGCGTTTATCGTCGACTC
CCGCCGCCGGGGGCGGGGCTCGTCGTAA

Protein sequence : 
MLTLLLEPFQFGFINQALLMVLAIALPCALLSVFLVLNGWALLGDAMSHAVFPGIVMAWMLGLPLSAGAFVAGLFCAVAS
GWLKDNSRIKQDTLMGIVFSGMFAAGLVLYIALKPEVHLDHILFGDLLGILAEDILPTLVITLGIIMILALKWRDFLLFS
FDAQQARACGLAIGWLHYGLLAMVALTIVASLKAVGIILSVSLLIAPGAIALLLARRFSRALLLATGVAALVPVSGVYLS
FFIDSAPAPTIVVLFALVFCAAFIVDSRRRGRGSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-74 67
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-74 67
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 3e-74 67
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 8e-74 66
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 8e-74 66

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EBL_c34940 YP_006321060.1 iron transport system membrane protein BAC0352 Protein 2e-74 67
EBL_c34940 YP_006321060.1 iron transport system membrane protein BAC0442 Protein 5e-51 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EBL_c34940 YP_006321060.1 iron transport system membrane protein VFG0528 Protein 1e-74 67