Gene Information

Name : EBL_c32510 (EBL_c32510)
Accession : YP_006320825.1
Strain : Escherichia blattae DSM 4481
Genome accession: NC_017910
Putative virulence/resistance : Virulence
Product : putative typ II secretion system protein E
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3347318 - 3348685 bp
Length : 1368 bp
Strand : +
Note : -

DNA sequence :
ATGACAACCCACACCCTGAACACGCTGTGCAGCCAGCATCAGGCCGTTTTCCTGCGTGAGGATGAACACAGCCTGTATAT
TGCCGTGGCCCGCCCCCCGGCAGAGCACTTGCTGGGGGCGCTGCGCTTTACCAGCAACAAACAGGTACACGTCAGCTACT
GGTCCGCTGAACAGCTGGAAAAGGCCAGCCTGGCACACCCGGAGGGGCCGACCCCGGGGCAGGAAGACGATCCGCTGGAG
ACCATACTGGCGGGCGCCATTGCCCGCCGGGCTTCGGATATTCATATTGAGCCCGGTGACGGGCACCTGACGATTCGCCT
GCGGGTAGACGGTGTATTGCAGCAGCTGCAAGAGCTGCCAGCCGGGCAGGCTGCTCCGCTACTGGCCCGCCTGAAGATAA
GCGCAGGCCTGGATATTGCCGAGCGCCGCCTGCCCCAGGACGGGCAGTTCAGCACCAGCGTTGCCGGCACAACCCTGGCA
CTACGGCTTTCTACTCTGCCCTGTCGCTACGGTGAAAAAGCCGTGCTGCGGTTACAGGCACCACAGGCGGCGCAATACTC
CGCAGAGATACCGGGCATGACGAATACACAGCAGGCGCTATGGCAGCGGGCCCTTTCCAGCCCCCAGGGGCTGATACTGG
TGACCGGCCCCACAGGAAGCGGCAAAACCCGCACCCTGTATGCGGGGCTGCACGCCCTTAACCGCAGCGGGGTAAATATC
TGCAGCGTGGAGGATCCGGTAGAGATCCCGATACCCGGGATCAACCAGACCCAGATCAACACCAAAGCCGGGCTGGATTT
CCCGCTGATCCTGCGCGCCTTACTGCGCCAGGATCCGGACATCATTATGATCGGGGAGATTCGCGACGCGGTGACCGCAG
ATATCGCCATCAAAGCGGCGCAAACCGGGCACCTGGTGCTTTCCACGCTGCATACCAACTCCACAACAGAGACGGTCATC
CGCCTGCAGCAGATGGGGATCCCCGGCTGGATGCTGGCCTCCACGTTGCGGCTGATCGTTGCCCAGCGCCTGGTCAGGCG
GCTGTGCCCCCACTGTCGCCAGCCCGCAAGTGAACCGGCGGTGCTGACCAGCCCGGCGGGTAAAGATCCCGGCGAGATAG
CGGAACACTGGCTGCCCCGGGGCTGTGAGCGCTGCTATTCCGGCTACTACGGGCGCGAAGCGCTGTTTGAAATGCTCCCG
CCGGATCCCGCCATGCGCCAGGCGATTATCCGGGGGGCAGACAGCGACGCGCTGGCCCGCCAGGCCCGGGACGGTGGGCA
CCCGACACTTGCCCGGAGCGCACACGCGGCTATCCGCCAGGGGGTAACCTCGGTCAGCGAGGTCTGGCGGGTGATGGGGG
ATCTCTGA

Protein sequence :
MTTHTLNTLCSQHQAVFLREDEHSLYIAVARPPAEHLLGALRFTSNKQVHVSYWSAEQLEKASLAHPEGPTPGQEDDPLE
TILAGAIARRASDIHIEPGDGHLTIRLRVDGVLQQLQELPAGQAAPLLARLKISAGLDIAERRLPQDGQFSTSVAGTTLA
LRLSTLPCRYGEKAVLRLQAPQAAQYSAEIPGMTNTQQALWQRALSSPQGLILVTGPTGSGKTRTLYAGLHALNRSGVNI
CSVEDPVEIPIPGINQTQINTKAGLDFPLILRALLRQDPDIIMIGEIRDAVTADIAIKAAQTGHLVLSTLHTNSTTETVI
RLQQMGIPGWMLASTLRLIVAQRLVRRLCPHCRQPASEPAVLTSPAGKDPGEIAEHWLPRGCERCYSGYYGREALFEMLP
PDPAMRQAIIRGADSDALARQARDGGHPTLARSAHAAIRQGVTSVSEVWRVMGDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 3e-66 43
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-66 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EBL_c32510 YP_006320825.1 putative typ II secretion system protein E VFG2426 Protein 9e-71 46
EBL_c32510 YP_006320825.1 putative typ II secretion system protein E VFG0182 Protein 2e-71 46
EBL_c32510 YP_006320825.1 putative typ II secretion system protein E VFG2048 Protein 6e-68 44
EBL_c32510 YP_006320825.1 putative typ II secretion system protein E VFG1876 Protein 3e-70 42