Gene Information

Name : ribD (EBL_c29080)
Accession : YP_006320489.1
Strain : Escherichia blattae DSM 4481
Genome accession: NC_017910
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2995423 - 2996526 bp
Length : 1104 bp
Strand : -
Note : beta subunit NrdB

DNA sequence :
ATGCGTGATGAATTTTACATGGCCCGGGCGCTACAGCTTGCGGGCCGTGGGTGCTTTACCACCGCGCCCAACCCCAATGT
GGGCTGCGTTATCGTGCGCGACGGGGAGATTGTCGGTGAAGGGTTTCACTACCGGGCCGGTGAGCCCCACGCGGAGGTTC
ACGCCCTGCGTATGGCGGGTGAGAAAGCCCGCGGCGCCACCGCGTATGTCACCCTTGAGCCCTGTAGTCACCACGGCCGC
ACCCCCCCGTGCTGCGATGCGCTTATCGAAGCGGGGGTCAGCCGGGTGGTTGCCGCTATGCAGGATCCCAACCCGCAAGT
GGCCGGGCGCGGGCTGCATCGCCTGAAGCAGGCCGGTGTTGAGGTCAGCCACGGGCTGATGAGGCACGAAGCAGAAGCGC
TGAACCGCGGTTTTTTTAAGCGTATGCGCACCGGTTTCCCCTGGGTACAGGTGAAGCTGGGGGCCTCGCTGGACGGGCGC
ACGGCCATGGCCTCAGGCGAGAGCCAGTGGATTACTTCCCCCCAGTCCCGCCGGGATGTGCAGCGGCTAAGAGCCCGCAG
TGCGGCTATTCTTACCAGTAGCGCCACCGTGCTGGCCGATGATCCGTCACTGACGGTCCGCTGGGACGAGCTGGACGACG
AGACCCGGGCCATCTATCCCCGGGAAGATGTCCGCCAGCCCGTGCGGGTGGTGATCGACGGCCAGAGCCGGGTCACACCT
GCCCACCGGCTGGTAACGCAGCCGGGCAATACCTGGCTGGTGCGCCCGCAGGCAGATGCGCTCAGCTGGCCGGAGTCTGT
GGAGCAGCTGATTATTCCGCAGCACCAGGGGCATATTGATCTGGTCCTGCTGCTGATGCAGCTGGGCAAGCGCCAGATTA
ACAGTGTCTGGGTTGAAGCAGGCCCGCAGCTGGCGGGGGCGCTGTTGCAGGCCGGGGTGGTCGATGAGCTGATTTTATAT
GTGGCGCCGAAACTGCTGGGCAGTGATGCCCGGGGGCTGTGCCAGTTACCGGGGCTGACCGCACTGGCGGATGCCCCGGC
GTTCAGTTTTAGCCAGATCCGCCGTGTCGGGCCGGATCTGTGTCTGCATTTGTCCGTGGCCTGA

Protein sequence :
MRDEFYMARALQLAGRGCFTTAPNPNVGCVIVRDGEIVGEGFHYRAGEPHAEVHALRMAGEKARGATAYVTLEPCSHHGR
TPPCCDALIEAGVSRVVAAMQDPNPQVAGRGLHRLKQAGVEVSHGLMRHEAEALNRGFFKRMRTGFPWVQVKLGASLDGR
TAMASGESQWITSPQSRRDVQRLRARSAAILTSSATVLADDPSLTVRWDELDDETRAIYPREDVRQPVRVVIDGQSRVTP
AHRLVTQPGNTWLVRPQADALSWPESVEQLIIPQHQGHIDLVLLLMQLGKRQINSVWVEAGPQLAGALLQAGVVDELILY
VAPKLLGSDARGLCQLPGLTALADAPAFSFSQIRRVGPDLCLHLSVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-57 47
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-57 47