Gene Information

Name : cadA1 (EBL_c28010)
Accession : YP_006320383.1
Strain : Escherichia blattae DSM 4481
Genome accession: NC_017910
Putative virulence/resistance : Virulence
Product : RNA methyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2881198 - 2883411 bp
Length : 2214 bp
Strand : +
Note : subunit of lysine decarboxylase

DNA sequence :
ATGAATATCATTGCGATTATGAATGACGTTACGGCCTACTTTAAGGAAGAAGCACTCCGTGAATTACACGAAGAGCTGGA
AAAAGAAGGCTTTCGCATCGCTTATCCGCAAGGGAAGGCCGACCTGTTAAAGCTGATTGAGAATAATGCCCGCCTGTGCG
GTGTTATTTTTGACTGGGATACCTTCAGCCTTGAACTCTGTGCGGATATCAGCAAGCTGAATAAACGCATGCCGGTTTAT
GCTTTTGCCAATAATTACTCCAGTCTTGATGTCAGACTCAGCGATCTGCAGCTCAATGTGCGTTTCTTCGAATATGCGCT
GGGCACCGCCGGTGATATTGCGGTGAAAATTCGCCAGAGCACTGACCACTATATTGATACTATTCTGCCGCCGCTGACGA
AGGCGCTGTTTAAGTATGTCAAAGAGGAAAAATATACCTTCTGTACCCCGGGTCATATGGGCGGTACCGCCTTCCAGAAA
AGCCCGGTGGGCACGCTGTTTTATGATTTCTACGGCGAAAACACCATGCGGTCCGATATTTCCATTTCGGTAACCGAGCT
GGGTTCGCTCCTTGACCACAGCGGCCCCCACAGAGAAGCAGAAGAGTATATTGCCCGCACGTTTAACGCCGAGCGCAGCT
ATATCGTCACTAACGGGACCTCTACAGCGAACAAAATTGTTGGTATGTACTCCTCCCCCGCCGGGGCAACCATCCTTATT
GACCGTAACTGCCATAAATCCCTGACCCATCTGATGATGATGAGTAACGTGATCCCGATTTATTTCCGCCCGACCCGTAA
CGCCTACGGTATTCTGGGGGGGATCCCGAAGCAGGAATTTACCCGCGAGAGCATTGAAGAGCGGGTAAAAAATACCCCGA
ACGCCACCTGGCCGGTTCATGCGGTCATTACCAACTCCACCTACGACGGCCTGCTGTACAACACCGACTACATTAAAAAC
ACCCTGGAGGTGAAATCTATCCATTTCGACTCCGCATGGGTGCCTTATACCAACTTCAGCCCTATCTACAAAGGGCTCTG
CGGCATGAGCGGTGACCGGGTGCCGGGCAAAGTAATTTATGAAACCCAGTCGACCCATAAACTGCTGGCGGCATTTTCTC
AGGCGTCGATGATCCACGTTAAAGGGGATTTCAATGAAGAAACCTTTAACGAAGCCTATATGATGCACACCTCTACCTCG
CCCCATTACGGGATTGTCGCCTCTGCCGAAATGTCGGCCGCCATGATGCGCGGCGTAACGGGCCAGCGCCTGATTAACGA
CTCTATCGACGGGGCTATTCGTTTTCGTAAAGAGATCCGCCATCTGAAGGCGGAATCTGAAGGCTGGTTCTTTGATGTCT
GGCAGCCGGACAGCATTGACGATCTGGAGTGCTGGCCCCTTAACCCGCGCAATAAATGGCACGGTTTCGCCGATATGGAC
GAAAACCACATGTACCTTGACCCCATCAAGGTGACCCTGCTGACCCCGGGGCTGAGCCCGGACGGCGCCCTGGAAACCAG
CGGTATTCCGGCCTCTATCGTCTCGAAATATCTTGATGAGCACGGGATTATCGTTGAGAAAACCGGCCCTTATAACCTGC
TGTTCCTGTTCAGTATCGGGATCGACAAAACCAAGGCGCTCAGCCTGCTGCGCGCGCTGACCGATTTTAAACGGGTCTAT
GATCTCAACCTGAAGGTGCAAAATGTCCTGCCGTCCCTCTATAACGAGGCGCCGGATTTCTATAAAAACATGCGCATCCA
GGATCTGGCCCAGGGGATCCACGATCTGACCGTGCAGCATAACCTGCCGGATCTGATGTACCGCGCGTTCGAAGTGTTGC
CGGAAATGGTCATGACCCCGCACGACGCCTTCCAGGAGGAGGTGCGTGGCAATGTTGAGAGCTGCGAGCTTGATGATCTG
CTGGGCAAAGTGAACGCCAACATGATCCTGCCGTATCCTCCGGGTGTGCCGGTGGTTATGCCGGGTGAACGGCTCACCGA
AGAGAGCCTGCCGGTGCTGAGCTTCCTGCAGATGCTGTGCGAAATCGGCGAGCACTACCCGGGCTTTGAAACCGATATCC
ACGGCCTGCACCGTAACGAGGAAACCGGTAAATATGAAGCCATGGTGCTGCTCGACAGCGTAGTGCACTCAGACTCAAAA
CCCAGTGACACGGTGAAAAAACACGCGGGGAAAAAGGCCGTCTCCGGTGAGTAA

Protein sequence :
MNIIAIMNDVTAYFKEEALRELHEELEKEGFRIAYPQGKADLLKLIENNARLCGVIFDWDTFSLELCADISKLNKRMPVY
AFANNYSSLDVRLSDLQLNVRFFEYALGTAGDIAVKIRQSTDHYIDTILPPLTKALFKYVKEEKYTFCTPGHMGGTAFQK
SPVGTLFYDFYGENTMRSDISISVTELGSLLDHSGPHREAEEYIARTFNAERSYIVTNGTSTANKIVGMYSSPAGATILI
DRNCHKSLTHLMMMSNVIPIYFRPTRNAYGILGGIPKQEFTRESIEERVKNTPNATWPVHAVITNSTYDGLLYNTDYIKN
TLEVKSIHFDSAWVPYTNFSPIYKGLCGMSGDRVPGKVIYETQSTHKLLAAFSQASMIHVKGDFNEETFNEAYMMHTSTS
PHYGIVASAEMSAAMMRGVTGQRLINDSIDGAIRFRKEIRHLKAESEGWFFDVWQPDSIDDLECWPLNPRNKWHGFADMD
ENHMYLDPIKVTLLTPGLSPDGALETSGIPASIVSKYLDEHGIIVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKRVY
DLNLKVQNVLPSLYNEAPDFYKNMRIQDLAQGIHDLTVQHNLPDLMYRAFEVLPEMVMTPHDAFQEEVRGNVESCELDDL
LGKVNANMILPYPPGVPVVMPGERLTEESLPVLSFLQMLCEIGEHYPGFETDIHGLHRNEETGKYEAMVLLDSVVHSDSK
PSDTVKKHAGKKAVSGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 78
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 0.0 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadA1 YP_006320383.1 RNA methyltransferase VFG1670 Protein 0.0 67