Gene Information

Name : kdsB (EBL_c25020)
Accession : YP_006320099.1
Strain : Escherichia blattae DSM 4481
Genome accession: NC_017910
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2569402 - 2570148 bp
Length : 747 bp
Strand : -
Note : -

DNA sequence :
ATGAGTTTTGTCGTTATCATTCCTGCCCGCTACGCCTCTACCCGGCTGCCGGGTAAGCCCCTGAAAGATATCAACGGTAA
ACCGATGATAGTCCACGTGCTGGAGCGCGCCCGTGAATCTGGCGCCGGGCGGGTGATTGTTGCCACGGACCATCCGGATG
TGGCCCGGGCGGTTGAAGCCGCCGGGGGCGAAGTCTGCATGACGCGTGCGGATCACCAGTCCGGCACTGAGCGGCTGGCA
GAGGTGGTGGATAAATACCAGTTCAGCGACGATACCCTGATCGTGAACGTGCAGGGCGACGAGCCGATGATCCCGCCGGT
AATTATCCGCCAGGTGGCCGATAATCTGGCCCGGGTGGATGCGGGCATGGCGACCCTTGCGGTGCCGGTTACCGATGCAC
ACGAGGCCTTTAACCCCAATGCGGTAAAAGTGGTGCGCGACGCCCGGGGCTTTGCGCTCTATTTCTCCCGGGCAACCATT
CCCTGGGATCGGGACCGTTTTGCCCAGTCCCGCGATACCATAGGCGACAGCTTACTGCGCCATATTGGTATCTACGGCTA
CCGGGCAGGGTTTATCCGCCGCTACGTGACCTGGGCGCCGGGCCCGCTGGAGCAGATAGAAATGCTCGAACAGCTGCGCG
TGCTGTGGTATGGCGAAAAAATCCACGTGGATGTGGCCCAGGCCGTGCCTGCCGTTGGCGTTGATACGCCAGAGGATCTG
GCCCGGGTTCGCGAGGCGATGGCCTGA

Protein sequence :
MSFVVIIPARYASTRLPGKPLKDINGKPMIVHVLERARESGAGRVIVATDHPDVARAVEAAGGEVCMTRADHQSGTERLA
EVVDKYQFSDDTLIVNVQGDEPMIPPVIIRQVADNLARVDAGMATLAVPVTDAHEAFNPNAVKVVRDARGFALYFSRATI
PWDRDRFAQSRDTIGDSLLRHIGIYGYRAGFIRRYVTWAPGPLEQIEMLEQLRVLWYGEKIHVDVAQAVPAVGVDTPEDL
ARVREAMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 1e-33 46
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 3e-32 45
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 2e-32 45