Gene Information

Name : EBL_c16930 (EBL_c16930)
Accession : YP_006319298.1
Strain : Escherichia blattae DSM 4481
Genome accession: NC_017910
Putative virulence/resistance : Resistance
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1760658 - 1761032 bp
Length : 375 bp
Strand : -
Note : AraC family

DNA sequence : 
ATGTCCAGACGTAATAATGATGCCGTAACGGTGCATTGCATTTTAGACTGGATAGAGGACAACCTGGAATCACCACTTTC
CCTTGATGTGGTGTCCCAGCGTTCCGGCTACTCTAAGTGGCACTTGCAACGGATGTTCAAAAAAGAGACAGGACACTCTC
TGGGTCAGTATATTCGCAACCGCAAACTGACTGAAATTGCCATGAAGCTGAAAGACAGCAATGAGCCGATCCTTTATCTG
GCAGAGCGCTACGGGTTTGAATCCCAGCAAACGCTGACCCGTACGTTTAAAAACTACTTTTCCGTACCGCCCCATAAATA
CCGCATAACCAATATGCACGGTGAGACGAAGTTTTTGCACCCCCTTAACCACTGA

Protein sequence : 
MSRRNNDAVTVHCILDWIEDNLESPLSLDVVSQRSGYSKWHLQRMFKKETGHSLGQYIRNRKLTEIAMKLKDSNEPILYL
AERYGFESQQTLTRTFKNYFSVPPHKYRITNMHGETKFLHPLNH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 1e-20 45
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 1e-20 45
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 2e-20 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EBL_c16930 YP_006319298.1 transcriptional regulator NC_002695.1.917339.p Protein 6e-52 88
EBL_c16930 YP_006319298.1 transcriptional regulator BAC0560 Protein 6e-52 88
EBL_c16930 YP_006319298.1 transcriptional regulator CP000647.1.gene1624. Protein 2e-50 87
EBL_c16930 YP_006319298.1 transcriptional regulator CP001138.1.gene1637. Protein 6e-51 87
EBL_c16930 YP_006319298.1 transcriptional regulator CP000034.1.gene1596. Protein 9e-52 87
EBL_c16930 YP_006319298.1 transcriptional regulator CP001918.1.gene2033. Protein 1e-49 85
EBL_c16930 YP_006319298.1 transcriptional regulator CP001138.1.gene612.p Protein 1e-22 46
EBL_c16930 YP_006319298.1 transcriptional regulator NC_010558.1.6276025. Protein 6e-21 45
EBL_c16930 YP_006319298.1 transcriptional regulator NC_002695.1.914293.p Protein 3e-20 43
EBL_c16930 YP_006319298.1 transcriptional regulator BAC0371 Protein 3e-20 43
EBL_c16930 YP_006319298.1 transcriptional regulator CP001138.1.gene4488. Protein 5e-21 43
EBL_c16930 YP_006319298.1 transcriptional regulator CP000034.1.gene4505. Protein 5e-20 43
EBL_c16930 YP_006319298.1 transcriptional regulator CP001918.1.gene327.p Protein 3e-20 42
EBL_c16930 YP_006319298.1 transcriptional regulator CP000647.1.gene4499. Protein 6e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EBL_c16930 YP_006319298.1 transcriptional regulator VFG1038 Protein 6e-21 45
EBL_c16930 YP_006319298.1 transcriptional regulator VFG0585 Protein 5e-21 43