|
Name : OOM_0717 (OOM_0717) Accession : YP_006316685.1 Strain : Francisella noatunensis Toba 04 Genome accession: NC_017909 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein Function : - COG functional category : - COG ID : - EC number : - Position : 703293 - 705836 bp Length : 2544 bp Strand : - Note : COG0249;(HMMSmart:IPR007696);DNA mismatch repair protein MutS, core;Molecular Function: ATP binding (GO:0005524), Biological Process: mismatch repair (GO:0006298), Molecular Function: mismatched DNA binding (GO:0030983);(HMMSmart:IPR000432);DNA mismatch r DNA sequence : ATGAAAGAAGTTTCAAATCACACACCAATGATACAGCAGTATTTGAAAATTAAATCTCAATATCCGGATATATTACTATT TTATCGAATGGGTGACTTTTACGAGCTTTTTTTTGATGATGCAACAAACGCTGTAGAGCTACTAGACATAACCCTCACTG CTCGAGGAAAATCAAATGGTGAATCAATACCGATGGCTGGTGTGCCATATCACGCTGCAGAAGGCTATATCGCCAAAATT GTCAAAAAAGGATTATCTGTTGCGATATGCGAGCAAATAGGAGATCCAAGCACTTCAAAAGGTCCTGTTGAACGACAAGT TACACGTATAATAACTCCGGCAACAGTTTCTGAAGAAGCCTTCTTAGATAGTAACCAAGATAGCATTCTCGTAAGTATCT ATGAAAAAAACAATAAATATCACATCGCGTATACTAGCTATACTCAAGGCAAAATTCATCTTGTAAATACAATGAAAAAT TTATCTGATCTAAAAAATCAGATATTAAAGCTCTCTCCTCAAGAGATAATTACCAACTCTAATAACCTTATCCAAAAGAA TATTTTTAACAAACCAGTAAAGGTTTTGGAAGAATGGTATTTTAGTAATTTTGAGGCAAAAAAGCATATAGTAGACACCT TTGATAACAGTTTTGCAAATAACATTCTAAACTCATATAAAAAAGAACAACTAACAGCTATCGGATCAATACTTGCTTAT TTAACAAATACACTTAAAAGTATTCCTAAACACATTTCAGACATCCATCTAGATGAAGATCAAAACATACTAAACATAGA TAGTAATAGTAGAAATAATTTAGAGCTAGATAATAATTCAAAAAGTAGCCTTCTAAACATAATGGATAAATGTAAAACTA GTTTAGGCAGTAGACTTCTAAGGAGATACTTCAAAAACCCTACTAGAGATCTAAATAAAATAGCTTTCCGTCATAATGTT ATAAAAGCATTAAAGGAACAACACCATTTCTTAAAAGTTCAGGATATTCTGTCTTATATAAATGACATTGAAAGGATAAT TTCTCGCGTTGCTCTAGGAACAGTAAAACCTAAAGATCTAGTATCTTTTAATAGCTCTCTCGAGCAACTACCTAAACTCA AGAATCTACTTAAAGAAATAAACACCTCTGAAATTATAAATATAAATAATCACATCCATCAAATTGATGAACTAACAGAA CTACTAAACAAGGCTATTGTAGATAATCCCCCAGTGACCATTCGCGATGGTGGCGCCATAAAACATGGTTTCGACCAAGA GCTTGATGAGTTAAGAGGACTAAAAGACAACTCTTACGATTTTTTATTAAAATTTGAAACTCTACAAAAACAAAAAATAG GGATTAATACACTAAAAGTTGGTTATAACCGTGTGCATGGTTATTACATTGAACTCTCGAAACAATATGCTGACAAAGTC CCAGCTGAGTATATCAGACGCCAAACATTAAAAGCTAGTGAGCGCTATATTACTAATGAGCTAAAAGCTTTTGAAGATAA GATTCTCTCAGCAAAAGAAAAAGCTTTAGCTAGAGAAAAGCTTATCTACGATGTCCTATTGAATAAAGTCTTAGAATACT ACTCTCAAATCCAACAGACTGCAGCAAGTATTGCAAAAATAGATGTTTTAGCAAACTTTGCAGAAAGAGCTATCAAACTA AACCTAAATCAACCTAAATTCAATAAAACTGGTAAGTTAGATATAAAAGAGGTTCGTCATCTAGCGATCGAGCAAAATAT TGATGAACCTTTTATACCCAATGATACCCTATTAAGTACAGACACTTATACATTAGAAATAATCACTGGACCTAACATGG GTGGTAAATCCACATATATGCGTCAAGTTGCCCAACTTATCTTTCTAGCATATATAGGCTCATATGTGCCGGCTAACTAT GCGGATATTTGCGATATAGACACCATATATACTCGGATTGGTGCCTCAGATGACATATCTAGTGGCAGATCCACATTCAT GGTTGAAATGACTGAAACAGCTTACATTCTTAACAATGCTACTCAAAAGTCTCTAGTAATCATGGATGAAATCGGTAGAG GTACAAGTACTTTTGATGGTTTATCACTTGCAAAAGCTTGTGCAGAAAAATTTGCAAAAATTGGTGCATTGACTCTTTTT GCTACGCACTACTTTGAGCTTACAGAGTTAGTTAATCAGTATCCAAATACAAAGAATATCCATTTTGAAGCTAAAGAATA TAAAGACAATATCTATTTCATGCACAAAGCAGTTGCTGGTGCGGCTAAAAAATCCTATGGTATTCAAGTAGCTAAATTAG CTGGCATCTCAAAAGATGTTTTAGAATCAGCAAAGAAAAATCTAGCTAATTTAGAAAAAGGACAAGCTAAATTAAATATC TCAGATCAACCCCAACAAAATCTCCAGCTTGATCAAACAACCATACAAAAAAATCATATTAAAGAGCGACTTGAAACAAT AGATATCAACTCAATAACGCCTATCGAGGCTCTAAATATACTCTTTGAACTAAAAAAGCTCTAA Protein sequence : MKEVSNHTPMIQQYLKIKSQYPDILLFYRMGDFYELFFDDATNAVELLDITLTARGKSNGESIPMAGVPYHAAEGYIAKI VKKGLSVAICEQIGDPSTSKGPVERQVTRIITPATVSEEAFLDSNQDSILVSIYEKNNKYHIAYTSYTQGKIHLVNTMKN LSDLKNQILKLSPQEIITNSNNLIQKNIFNKPVKVLEEWYFSNFEAKKHIVDTFDNSFANNILNSYKKEQLTAIGSILAY LTNTLKSIPKHISDIHLDEDQNILNIDSNSRNNLELDNNSKSSLLNIMDKCKTSLGSRLLRRYFKNPTRDLNKIAFRHNV IKALKEQHHFLKVQDILSYINDIERIISRVALGTVKPKDLVSFNSSLEQLPKLKNLLKEINTSEIININNHIHQIDELTE LLNKAIVDNPPVTIRDGGAIKHGFDQELDELRGLKDNSYDFLLKFETLQKQKIGINTLKVGYNRVHGYYIELSKQYADKV PAEYIRRQTLKASERYITNELKAFEDKILSAKEKALAREKLIYDVLLNKVLEYYSQIQQTAASIAKIDVLANFAERAIKL NLNQPKFNKTGKLDIKEVRHLAIEQNIDEPFIPNDTLLSTDTYTLEIITGPNMGGKSTYMRQVAQLIFLAYIGSYVPANY ADICDIDTIYTRIGASDDISSGRSTFMVEMTETAYILNNATQKSLVIMDEIGRGTSTFDGLSLAKACAEKFAKIGALTLF ATHYFELTELVNQYPNTKNIHFEAKEYKDNIYFMHKAVAGAAKKSYGIQVAKLAGISKDVLESAKKNLANLEKGQAKLNI SDQPQQNLQLDQTTIQKNHIKERLETIDINSITPIEALNILFELKKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 6e-163 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| OOM_0717 | YP_006316685.1 | DNA mismatch repair protein | VFG0562 | Protein | 0.0 | 46 |
