Gene Information

Name : OOM_0643 (OOM_0643)
Accession : YP_006316626.1
Strain : Francisella noatunensis Toba 04
Genome accession: NC_017909
Putative virulence/resistance : Unknown
Product : site-specific recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 631488 - 632366 bp
Length : 879 bp
Strand : +
Note : COG4974;recomb_XerD: tyrosine recombinase XerD;(HMMTigr:IPR011932);Tyrosine recombinase XerD;Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: cell cycle (GO:0007049), Biological Process:

DNA sequence : 
ATGTCTACAGCCGTTGATGCTTTTCTTGATAATCTTTGGCTTGAGCATGGCTTAAGTCAAAACACTATTTCATCTTATCG
TACAGATCTAAAGTTTTTACAAAATTATTTCTCGCAAGCAGAATTAATTAATCTCGATTTTGAGCAGTTATATGCTTTTA
TATCTTATCGTTCTAAGAATGGTTATAGTAGCCGATCTAATGCACGTATGATATCTACATTACGTAAGTTCTATAATTGG
CTTATATCGACAGATCAAGTTACTACTAATCCTACTACAAAATTAACCTTGCCGAAGTTAGCTAAAAAGTTGCCTAAAGA
TATGACAGAGACTGATGTCGAAAGACTACTTCAAGCTCCTGACTTAACGTATGATATTGGTATTCGTGATAAGGCGATGC
TAGAGCTTATGTATGCTACGGGTTTGAGAGTTAGTGAGTTAGTTGGTCTAAATACTCATGATATTGATCTAAATATAGGA
GTAATACAAGTAATGGGCAAAGGCTCAAAAGAGAGAATTGTACCCATTGGGGAATATGCCCTTGAATATTTACACAAGTA
TTTTGAAGAGTCGCGCAAGTCTTTAGCTAAAAATTTTAAAGAAAAAGCAGTTTTTATTAGCAAACATTCAAAGAGAATAA
CTCGACAATCTTTTTGGCATCGTATTAAGAGCTATGCACTTATTGCAGGCATAAACACAGATATATCCCCACATACTTTA
AGACATGCTTTTGCAACACATTTGCTCAATCATGGTGCAGATCTTAGATCGGTTCAATTGTTGTTAGGTCATAGTAATGT
ATCAACAACAACTATTTACACACATATATCGCAAAATCGTTTACAAGAAATATACCAAAAACATCATCCAAGAGGTTAA

Protein sequence : 
MSTAVDAFLDNLWLEHGLSQNTISSYRTDLKFLQNYFSQAELINLDFEQLYAFISYRSKNGYSSRSNARMISTLRKFYNW
LISTDQVTTNPTTKLTLPKLAKKLPKDMTETDVERLLQAPDLTYDIGIRDKAMLELMYATGLRVSELVGLNTHDIDLNIG
VIQVMGKGSKERIVPIGEYALEYLHKYFEESRKSLAKNFKEKAVFISKHSKRITRQSFWHRIKSYALIAGINTDISPHTL
RHAFATHLLNHGADLRSVQLLLGHSNVSTTTIYTHISQNRLQEIYQKHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-50 52
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-50 52