Gene Information

Name : OOM_1793 (OOM_1793)
Accession : YP_006317614.1
Strain : Francisella noatunensis Toba 04
Genome accession: NC_017909
Putative virulence/resistance : Virulence
Product : chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : 3.4.21.53
Position : 1805262 - 1807841 bp
Length : 2580 bp
Strand : +
Note : COG0542;(HMMSmart:IPR003593);ATPase, AAA+ type, core;Molecular Function: nucleotide binding (GO:0000166), Molecular Function: nucleoside-triphosphatase activity (GO:0017111);(HMMSmart:IPR003593);ATPase, AAA+ type, core;Molecular Function: nucleotide bindi

DNA sequence :
ATGGATATAAATAAATTTACAATAAAACTACAGGAAGCATTAGCAGAAGCTCAATCTTATGCTTTTCAGCAAAAAGCTAC
TGAGTTTACATCCGCACACACGCTAAAAGCTCTTTTGGAGCAAAATGATAGTGTTGTAATAGCAATATTAAGTGTTTGTG
GCATCAATACACAAAACTTTATAAAAGCTGTAAATGATATGGTTGATAGTGTTGCGGTACTATCTGGAGAAGGTAATCCT
CAAGTAGCGCCATCTAGAGATTTGATACCTACATTGCATAAGATACAAGAGCTTACTAATAAAAATGGCGATGAGTTTGT
TTCAAGTGAAGTTTTCTTATTAGCTACTTTAGAAGACAAAAGTTTAATAGGACTGTATAACAAGTTTGGTATAACAAAAG
AAAAACTTACAAAAGCAGTCAATGATTATCGTGGAGGGGAAAAAGTGAGTAGTCAAAATCAAGAAAATATGAAAGGTGCA
TTAGACAAATACACAGTAGATCTAACAGATCTAGCAAGAAAAGGAAAGATTGATCCTATTATTGGTAGAGATAGTGAAAT
TCGTAGAACTATACAAGTACTACAAAGAAGAACTAAGAACAATCCTGTGCTTATAGGTGAGCCTGGTGTTGGTAAAACTG
CTATTGTAGAAGGCTTAGCTCAACGAATAGTTAATGATGAAGTACCAGAAGGTGTCAAAGGCAAAAAAGTATTATCTTTA
GATATGGGTGCATTATTAGCTGGTGCTAAATTTAGAGGAGATTTTGAAGAACGTCTAAAATCTGTTTTAAAAGAACTCTC
AAAACAGGAAGGAAATATAATTCTATTTATAGATGAGTTACATACTATGGTTGGAGCAGGTAAAGCAGAAGGATCTATGG
ATGCTGGCAATATGCTTAAACCAGCTTTGGCTCGTGGTGAACTAAAATGTGTAGGTGCAACGACTCTAGATGAATATCGT
GAGTATGTTGAAAAAGATCCTGCACTTGAAAGAAGATTCCAAAAGGTGCTAGTTGATGAACCAACTGTTGAAGATACTAT
TGCTATCCTTAGAGGTCTAAAAGAAAGATATGAACTACATCATGGTGTGAATATTACAGACTCTGCTATTGTGAGCGCTG
CTACTTTATCACATAGATATATTACAGATAGACAACTACCTGACAAAGCTATTGATTTAGTAGATGAAGCAGCTAGTCAA
ATTCGTATGGAAATAGACTCTAAACCTGAAAAAATGGAGAGCTTGTACCGTAGAATTATCCAACTAAAAATGCAACGTGA
GCAGCTAAAAAAAGAAAAAGATGAGGCTACTAAGAAGCGTTTAGAGATATTAGAAACTGAAATCAAAGGCTTAGAATCTG
AATATCAAGGTTTTGAGGAGCTTTGGAAAGCAGAGAAGCTTAAGATGCAAGGTACAAGCAAGCTAAAAGAAGAGCTTGAG
AAAGCTAAGTTTGAGCTGGAGAAATACCAAAGAGCTGGTGATTTGAGCAAAATGGCTGAGCTACAATACGGTAAAATACC
AGAACTTGAAGCTCAAATTAAACAAATTGAAAATACTGAGGCAGAACCTTCTGAGAATAAACTTGTAAGAACATCTGTTA
CAGAAAATGAAATTGCTGATGTAGTTTCTAAAGCTACTGGAATACCTGTATCTAAGATGATGGAAGGAGAGAAAGATAAA
CTTCTAAATATGGAAAGCTTCCTACATAAAAGAGTAATTGGTCAAGATCAAGCAATAAAAGCTGTATCTAATGCTGTGAG
AAGATCTCGCTCTGGATTATCAGATCCAAATAGACCTATAGGTTCATTTATGTTCTTAGGTCCAACAGGTGTAGGTAAAA
CTGAGCTTACAAAAGCATTAGCAGAATTCTTATTTGATGATGAAGATGCAATGCTTAGAGTAGATATGTCTGAGTTTATG
GAGAAACATTCTGTAGCTAAACTAATCGGAGCTCCTCCAGGATATGTTGGTTATGAGCAAGGTGGTTATTTAACTGAGCA
TGTTAGAAGAAAACCTTATTCTGTAATCCTACTTGATGAAGTTGAAAAAGCTCACGCAGATGTATTTAACATCTTGCTGC
AAGTATTAGATGATGGGCGACTAACTGATGGTCAAGGTAGAACAGTTGACTTTAAAAATACTGTAATAGTTATGACTTCT
AACCTTGGTTCGCATAGAATCCAAGAAATGCAAGGTCAAGACTATAACACAGTCAAAGATGCTGTAATGGAAATGGTACT
TAGCCACTTCAGACCTGAGTTTGTAAATAGGGTTGATGATGCTATTGTATTTGAACCTCTAAACAAAGAGATGATAACTG
AAATAGCTAAGATACAAATTAAACGCTTAGAAAAACGTCTAAAAGATCTAAATATAGGTTTAGAAGTAACAGCTAAAGCT
ATGGATAAATTAGCTGATGCTGGTTTTGATCCTGTATTTGGTGCTAGACCACTTAAAAGAGCTATCCAAAGCAACTTAGA
AAATCCTCTAGCACTTAAACTGCTTGATGGTGAATTTAAGGCAGAAGATAAGATAGTTGTTGATGTAGATAGTGACCACA
ATATAGTTTTTTCTAAGTAA

Protein sequence :
MDINKFTIKLQEALAEAQSYAFQQKATEFTSAHTLKALLEQNDSVVIAILSVCGINTQNFIKAVNDMVDSVAVLSGEGNP
QVAPSRDLIPTLHKIQELTNKNGDEFVSSEVFLLATLEDKSLIGLYNKFGITKEKLTKAVNDYRGGEKVSSQNQENMKGA
LDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSL
DMGALLAGAKFRGDFEERLKSVLKELSKQEGNIILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYR
EYVEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDRQLPDKAIDLVDEAASQ
IRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDEATKKRLEILETEIKGLESEYQGFEELWKAEKLKMQGTSKLKEELE
KAKFELEKYQRAGDLSKMAELQYGKIPELEAQIKQIENTEAEPSENKLVRTSVTENEIADVVSKATGIPVSKMMEGEKDK
LLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEDAMLRVDMSEFM
EKHSVAKLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTS
NLGSHRIQEMQGQDYNTVKDAVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLKDLNIGLEVTAKA
MDKLADAGFDPVFGARPLKRAIQSNLENPLALKLLDGEFKAEDKIVVDVDSDHNIVFSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 9e-107 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OOM_1793 YP_006317614.1 chaperone ClpB VFG2076 Protein 1e-116 41