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Name : OOM_1678 (OOM_1678) Accession : YP_006317516.1 Strain : Francisella noatunensis Toba 04 Genome accession: NC_017909 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 1683273 - 1683746 bp Length : 474 bp Strand : - Note : COG0691;smpB: SsrA-binding protein;(HMMTigr:IPR000037);SsrA-binding protein;Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412);SSRP;(PatternScan:IPR020081);SsrA-binding protein, conserved site;SmpB;(HMMPfam:IPR00003 DNA sequence : ATGAGTAAACATAAGGTTTCTTCAGCAACTATTGCTAGAAATAAAAGAGCCTTCCATGATTATACTATTTTAGAGAAGTT TGAAGCTGGAATAGTCCTACAAGGATGGGAAGTAAAAAGTATCAGAGCTGGTAAAGTACAGATGATAGATAGTCATGCGC ATATCAAGCGTAGTGAAGCTTGGCTTTTTAATTGTCTAATAACTCCTCTATTGTCAGCATCTACTCATGTGGTAGCTGAT GCTTCAGCAAATCGTAAATTACTACTTAATCGCCGTGAGATAGACAAAATCATGGGACGAATTGAGCAAAAAGGATTTAC ATGTGTGCCTTTGGCTATGTATTGGAAAGGTACTCGTGTAAAAGTTGAAATAGCTCTTGCTCAAGGTAAAAAAGTTCACG ATAAGCGTCAGGCTCAAAAAGATAAAGATTGGGCTCGCGAAAAGAATAGAATCTTTAAGAAGGCGCATAGATAA Protein sequence : MSKHKVSSATIARNKRAFHDYTILEKFEAGIVLQGWEVKSIRAGKVQMIDSHAHIKRSEAWLFNCLITPLLSASTHVVAD ASANRKLLLNRREIDKIMGRIEQKGFTCVPLAMYWKGTRVKVEIALAQGKKVHDKRQAQKDKDWAREKNRIFKKAHR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 3e-33 | 50 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 4e-19 | 44 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 2e-18 | 44 |
