|
Name : OOM_1425 (OOM_1425) Accession : YP_006317304.1 Strain : Francisella noatunensis Toba 04 Genome accession: NC_017909 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : - COG ID : - EC number : 2.7.7.38 Position : 1424891 - 1425643 bp Length : 753 bp Strand : + Note : COG1212;CTP_transf_3;(HMMPfam:IPR003329);Acylneuram inate cytidylyltransferase;Biological Process: lipopolysaccharide biosynthetic process (GO:0009103);kdsB: 3-deoxy-D-manno-octulosonate cytidylyl;(HMMTigr:IPR004528);3-deoxy-D-manno-octulosonate cytidylyl DNA sequence : ATGGCTAATATTCATGTTGTAATCCCTGCTAGGCTTAAATCAACACGCCTACCTGGCAAGATGCTTGCAGATATTGCAGG TAAGCCAATGATTCAAAGAGTGTATGAGCAGGTAGCTAAATCAAAATTTAAAAGCATAATCATAGCTACAGACTTAGAAG AAATAAAAGAAGTTGCAGAAAATTTTGGTGCAAAAGTAATCTTAACAAGAGAGGATCATGAATCAGGTACAGATAGGATA GCTGAGGCAGTTACTAAGTTGGGTTTTGCTGATGAGGATATTGTTGTTAATGTACAAGGTGATGAACCTTTGATTCCTAT TGAGAATATTGAGCAAGCAGCACAATTATTAATTGAAAAGCCAGAAGCAGTTGTTTCAACATTGTGTGAGAGAATTACTG AAGCTGAAGACATATATAACCCAAATAATGTCAAAGTTGTTTTTGATAAAAATAACTATGCTTTATATTTTAGTAGAGCC TCAATCCCTTTTGAAAGAGGTTTCTCAGAGAATCATCAAGTTAGTATATCTGAATTTTTTAGGCATATAGGTATATATAC CTATAGAGTTGGCTTTTTGAAGCACTATGCAGAGCTTGCAATATCACCAATTGAAAAATATGAAGCTCTTGAACAACTAA GAGTGTTATATAATGGTTATAAAATTGCTGTTGAACAATCAGCTAAACCAACTCCTGTAGGTGTTGATACGCTTCAAGAT TTAGAAAAAGTAAGGAAACTATTTAATGTTTAA Protein sequence : MANIHVVIPARLKSTRLPGKMLADIAGKPMIQRVYEQVAKSKFKSIIIATDLEEIKEVAENFGAKVILTREDHESGTDRI AEAVTKLGFADEDIVVNVQGDEPLIPIENIEQAAQLLIEKPEAVVSTLCERITEAEDIYNPNNVKVVFDKNNYALYFSRA SIPFERGFSENHQVSISEFFRHIGIYTYRVGFLKHYAELAISPIEKYEALEQLRVLYNGYKIAVEQSAKPTPVGVDTLQD LEKVRKLFNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 6e-41 | 43 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 4e-41 | 43 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 4e-41 | 43 |
