Gene Information

Name : OOM_1235 (OOM_1235)
Accession : YP_006317133.1
Strain : Francisella noatunensis Toba 04
Genome accession: NC_017909
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.11
Position : 1242662 - 1243942 bp
Length : 1281 bp
Strand : -
Note : COG0172;Seryl_tRNA_N;(HMMPfam:IPR015866);Seryl-tRNA synthetase, class IIa, N-terminal;Molecular Function: nucleotide binding (GO:0000166), Molecular Function: serine-tRNA ligase activity (GO:0004828), Molecular Function: ATP binding (GO:0005524), Cellular

DNA sequence :
ATGCTTGATGCTAAATATATTAAAGATAATTTAGAAGAAGTGGCTGAGAAACTCGCAACTAGAGGTTATCAGTTTGATAT
AGCAGAATTCAAAGCTCAAGAAGCAAAAAGAAAAGACCTTCAAGAGAGAACCCAAGAGCTTCAATCTCAACGTAATACTA
TCTCCAAAGAAATAGGTAAAAGAAAGTCTAAAGGTGAAGATGCTAGTGACATTTTTGCCAAAGTTAATGATATCAACGAT
GAGCTAAAAGTAATCGAAAAAGAGCTTAAAGATCTTCAAGACTATATAAATAGTACTCTTCTATCAATGCCAAATCTTCC
AGCTGATGATGTACCCGTTGGTAAGGATGAGAGTGAAAATGTCAAGATAAAAAAATGGGGAACTCCTCGTGAATTTCACT
CTGAAGCTCAAGCTAAAGATCATGCAGATATTGGTGAAATACTTAATATGATTGACTTCAAAGCTGCAGCAAAAATTACA
GGTAGTCGCTTTGTGGTTCTAAAAAATAAATTTGCTAAGCTTCATCGTGCATTGACACAATTTATGTTAGATATGCATAC
GGAGAAGCATGGTTATGAAGAACTATATGTACCATATATGGTAAATAATGATAGTTTGTATGGGACAGGCCAGTTACCTA
AATTCTCTGAAAATTTATTTAAATTAGAAGGTGACTTTGAATATAGCCTGATACCAACAGCAGAAGTACCTATCACAAAT
CTAGTAAGAGATGAAATCTTAGATACAGAATCTCTGCCTAGATACTACACAGCACACACACCATGCTTTAGAAGTGAAGC
TGGTTCTTATGGACGTGATACTAAAGGATTAATTCGTCAACATCAGTTTGAGAAAGTTGAATTAGTACATATCACTATAG
CTGATAAAGGTGAAGAATCTTTAGAGCTATTAACGTCTCATGCAGAAAAAGTACTACAAAAACTAAACCTACCATACAGA
GTAGTCAAATTATGTACGGGAGATATGGGTTTTAGTGCGAAAAAAACCTATGATCTAGAAGTATGGATACCTTCTCAAAA
TACTTATAGAGAAATATCATCATGTAGTTGGTGTGGAGACTTCCAAGCACGTCGCATGAAAGCTAGACACAAAAACCCAA
GTATGAAAAAACCTGAATTGGTACATACTTTAAATGGTTCTGGTTTAGCAGTTGGTAGAACATTACTAGCTATTATTGAG
AATTACCAACAAGAAGATGGATCTATAATGATTCCTGAAGCACTTATTAACTATATGGGTGGAATTTCTGTTATTAAATA
A

Protein sequence :
MLDAKYIKDNLEEVAEKLATRGYQFDIAEFKAQEAKRKDLQERTQELQSQRNTISKEIGKRKSKGEDASDIFAKVNDIND
ELKVIEKELKDLQDYINSTLLSMPNLPADDVPVGKDESENVKIKKWGTPREFHSEAQAKDHADIGEILNMIDFKAAAKIT
GSRFVVLKNKFAKLHRALTQFMLDMHTEKHGYEELYVPYMVNNDSLYGTGQLPKFSENLFKLEGDFEYSLIPTAEVPITN
LVRDEILDTESLPRYYTAHTPCFRSEAGSYGRDTKGLIRQHQFEKVELVHITIADKGEESLELLTSHAEKVLQKLNLPYR
VVKLCTGDMGFSAKKTYDLEVWIPSQNTYREISSCSWCGDFQARRMKARHKNPSMKKPELVHTLNGSGLAVGRTLLAIIE
NYQQEDGSIMIPEALINYMGGISVIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 3e-106 56