Gene Information

Name : CDCO157_4307 (CDCO157_4307)
Accession : YP_006315172.1
Strain : Escherichia coli Xuzhou21
Genome accession: NC_017906
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4536894 - 4537322 bp
Length : 429 bp
Strand : +
Note : -

DNA sequence :
ATGGATGTATTATGCCCTTGCCTCTTTCATAAAAAGAGGCTAACAGTAAATATGAACAACATTAATCAATCGGAAAACAT
TAATATTCAATTAAATAAAGCGCCCCAAACAAATTTCGTTGATGAGCATACCTCGTTAGCCTCAGCCCCCTCTGCGGCAG
GTGCGGCTCAGTTTCTTGATCAATTACTCCCTAAAACAGCGGGAGTGTCTTCTCCAGAACAAGTGTTGATTGAAGAAATT
AAAAAGAGACATCTTGCAACAATGAACAGCGATCTCAGTTTCGATGCTCTATCTGCAGGTGGGCTCTCGCCAGAAGACGT
GCTCACCTTACAAAAGAATGTGCTCAACGCAAACGTCAACGTTGATGTCGTATCTAAGTTAGCAAGCCTCCTTTCAACAT
CGGTTACAAAATTAGTTTCGATGCAATAA

Protein sequence :
MDVLCPCLFHKKRLTVNMNNINQSENINIQLNKAPQTNFVDEHTSLASAPSAAGAAQFLDQLLPKTAGVSSPEQVLIEEI
KKRHLATMNSDLSFDALSAGGLSPEDVLTLQKNVLNANVNVDVVSKLASLLSTSVTKLVSMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC31517.1 L0038 Not tested LEE Protein 5e-33 100
unnamed ACU09462.1 type III secretion apparatus domain protein YscI/HrpB Virulence LEE Protein 5e-33 100
Z5123 NP_290272.1 hypothetical protein Not tested LEE Protein 7e-33 100
ECs4572 NP_312599.1 hypothetical protein Not tested LEE Protein 7e-33 100
unnamed AAC38380.1 rOrf8 Not tested LEE Protein 1e-28 92
rorf8 YP_003236092.1 chaperone Rorf8 Not tested LEE Protein 5e-28 91
unnamed AAK26711.1 unknown Not tested LEE Protein 8e-29 88
unnamed AAL57538.1 unknown Not tested LEE Protein 8e-29 88
st20 CAC81858.1 ST20 protein Not tested LEE II Protein 8e-29 88
unnamed CAI43878.1 hypothetical protein Not tested LEE Protein 8e-29 88
ECO103_3622 YP_003223479.1 T3SS component Virulence LEE Protein 1e-28 88
rorf8 YP_003232149.1 T3SS component Virulence LEE Protein 1e-28 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDCO157_4307 YP_006315172.1 hypothetical protein VFG0816 Protein 2e-33 100
CDCO157_4307 YP_006315172.1 hypothetical protein VFG0726 Protein 5e-29 92