Gene Information

Name : CDCO157_4306 (CDCO157_4306)
Accession : YP_006315171.1
Strain : Escherichia coli Xuzhou21
Genome accession: NC_017906
Putative virulence/resistance : Virulence
Product : protein SepZ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4536562 - 4536861 bp
Length : 300 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAGCAGCAAATTTAAGTCCTTCTGGTGCAGTAATGCCGCTGGCGACCTCACTCAGTGGAAATAACTCAGTGGATGA
GAAGACAGGAGTGATTAAACCAGAAAATGGAACAAATCGCACCGTTAGAGTTATAGCCGGATTAGCACTTACCACTACGG
CTCTGGCAGCTCTAGGTACAGGTATTGCAGCGGCATGCTCGGAGACGAGCAGCACAGAATACTTAGCCCTGGGTATTACT
TCTGGCGTACTAGGTACTCTTACTGCGGTTGGCGGTGCATTAGCGATGAAATATGCCTAA

Protein sequence : 
MEAANLSPSGAVMPLATSLSGNNSVDEKTGVIKPENGTNRTVRVIAGLALTTTALAALGTGIAAACSETSSTEYLALGIT
SGVLGTLTAVGGALAMKYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sepZ NP_290271.1 hypothetical protein Virulence LEE Protein 2e-26 100
sepZ AAC31516.1 L0037 Virulence LEE Protein 1e-26 100
ECs4571 NP_312598.1 SepZ Virulence LEE Protein 2e-26 100
unnamed ACU09461.1 hypothetical protein SepZ Virulence LEE Protein 1e-26 100
sepZ AAK26712.1 SepZ Virulence LEE Protein 2e-18 67
espZ YP_003232150.1 T3SS effector EspZ Virulence LEE Protein 2e-18 67
sepZ AAL57539.1 SepZ Virulence LEE Protein 2e-18 67
sepZ CAC81859.1 SepZ protein Not tested LEE II Protein 1e-18 67
unnamed AAL06366.1 SepZ Virulence LEE Protein 3e-17 65
espZ YP_003223478.1 T3SS effector EspZ Virulence LEE Protein 4e-11 62
sepZ AAC38401.1 SepZ Virulence LEE Protein 4e-17 60
espZ YP_003236091.1 T3SS secreted effector EspZ Virulence LEE Protein 2e-16 60
sepZ CAI43877.1 SepZ protein Virulence LEE Protein 3e-16 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDCO157_4306 YP_006315171.1 protein SepZ VFG0815 Protein 6e-27 100
CDCO157_4306 YP_006315171.1 protein SepZ VFG0727 Protein 2e-17 60