Gene Information

Name : CDCO157_4302 (CDCO157_4302)
Accession : YP_006315167.1
Strain : Escherichia coli Xuzhou21
Genome accession: NC_017906
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4532296 - 4532673 bp
Length : 378 bp
Strand : -
Note : -

DNA sequence :
ATGTTGGACAGAATTTTATCTATTCGTAAAAGCAGAGCGAACCGATTGAGAGAATCAATGGCTAAGATTAACTCTCAGAT
AAAAGAGGTGGATGGTAAACTCGATGACTGCGAGCAATCCATTAAAGAGTCGATTGCCTCTAAGCAGGCATATTGTGCAT
CGCTGGTGAATTTGGATAAAGTGTCGTTGTATAAATATCAGATTAAAAACAATGCATTTGATGAGCAAAAGCAGCGATTG
TATGAGAAAAAATCTTCACTTTCGAAGGAAAAGCGTTCATTGCTAGATTCACAAAAACGAACAAAAGAGAATCTGCAACA
TGTTAATAAATCAGTAGAAAAATTATCTTTTGCCATAAAGGAACATTACTTTGACTAG

Protein sequence :
MLDRILSIRKSRANRLRESMAKINSQIKEVDGKLDDCEQSIKESIASKQAYCASLVNLDKVSLYKYQIKNNAFDEQKQRL
YEKKSSLSKEKRSLLDSQKRTKENLQHVNKSVEKLSFAIKEHYFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC38384.1 Orf15 Not tested LEE Protein 3e-41 100
Z5118 NP_290267.1 hypothetical protein Not tested LEE Protein 4e-41 100
unnamed AAC31512.1 L0033 Not tested LEE Protein 3e-41 100
ECs4567 NP_312594.1 hypothetical protein Not tested LEE Protein 4e-41 100
unnamed ACU09457.1 ST25 protein Not tested LEE Protein 3e-41 100
ECO111_3751 YP_003236087.1 putative T3SS component protein Virulence LEE Protein 3e-41 99
st25 CAC81863.1 ST25 protein Not tested LEE II Protein 4e-41 98
ECO103_3617 YP_003223474.1 T3SS component Virulence LEE Protein 1e-40 98
unnamed CAI43873.1 hypothetical protein Not tested LEE Protein 4e-41 98
ECO26_5272 YP_003232154.1 T3SS component protein Virulence LEE Protein 6e-41 98
unnamed AAK26716.1 unknown Not tested LEE Protein 4e-40 97
unnamed AAL57543.1 unknown Not tested LEE Protein 4e-40 97
unnamed AAL06370.1 unknown Not tested LEE Protein 6e-38 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDCO157_4302 YP_006315167.1 hypothetical protein VFG0731 Protein 1e-41 100
CDCO157_4302 YP_006315167.1 hypothetical protein VFG0811 Protein 1e-41 100