Gene Information

Name : CDCO157_4288 (CDCO157_4288)
Accession : YP_006315154.1
Strain : Escherichia coli Xuzhou21
Genome accession: NC_017906
Putative virulence/resistance : Virulence
Product : protein EspB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4518019 - 4518957 bp
Length : 939 bp
Strand : -
Note : -

DNA sequence : 
ATGAATACTATTGATAATACTCAAGTAACGATGGTTAATTCCGCTTCGGAGAGTACGACCGGCGCTTCCAGTGCAGTTGC
CGCATCTGCTTTATCAATTGATTCATCTCTGCTTACTGATGGTAAGGTTGATATTTGTAAGCTGATGCTGGAAATTCAAA
AACTCCTCGGCAAGATGGTGACTCTATTGCAGGATTACCAACAAAAACAATTGGCGCAAAGCTATCAGATTCAGCAGGCC
GTTTTTGAGAGCCAGAATAAAGCTATTGAGGAAAAAAAAGCCGCGGCAACCGCTGCTTTGGTTGGCGGGATTATTTCATC
AGCATTGGGGATCTTAGGTTCTTTTGCAGCAATGAACAACGCGGCTAAAGGGGCTGGTGAGATTGCTGAAAAAGCAAGCT
CTGCATCTTCAAAGGCTGCTGGTGCGGCTTCTGAGGTTGCAAATAAAGCTCTGGTCAAGGCTACGGAAAGTGTTGCTGAT
GTCGCAGAGGAGGCATCCAGTGCGATGCAGAAAGCGATGGCCACAACAACGAAAGCAGCCAGCCGTGCATCTGGCGTTGC
AGATGATGTTGCGAAAGCCTCTGACTTTGCTGAAGATCTTGCAGACGCCGCCGAGAAGACAAGCAGAATCAATAAGTTGT
TGAATTCCGTAGATAAACTGACCAATACCACAGCATTTGTTGCCGTGACCAGTCTTGCTGAAGGTACGAAAACGTTGCCA
ACAACAATATCTGAGTCCGTCAAATCGACTCATGAGGTTAATGAACAACGTGCGAAGTCGCTGGAAAACTTCCAGCAGGG
GAATCTGGAGCTGTATAAACAAGACGTTCGCAGAACGCAGGATGATATCACGACTCGTCTGCGTGATATAACGTCCGCTG
TCCGCGATCTCCTTGAGGTCCAGAATCGTATGGGGCAATCGGGTCGCTTAGCTGGGTAA

Protein sequence : 
MNTIDNTQVTMVNSASESTTGASSAVAASALSIDSSLLTDGKVDICKLMLEIQKLLGKMVTLLQDYQQKQLAQSYQIQQA
VFESQNKAIEEKKAAATAALVGGIISSALGILGSFAAMNNAAKGAGEIAEKASSASSKAAGAASEVANKALVKATESVAD
VAEEASSAMQKAMATTTKAASRASGVADDVAKASDFAEDLADAAEKTSRINKLLNSVDKLTNTTAFVAVTSLAEGTKTLP
TTISESVKSTHEVNEQRAKSLENFQQGNLELYKQDVRRTQDDITTRLRDITSAVRDLLEVQNRMGQSGRLAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
espB NP_290254.1 hypothetical protein Virulence LEE Protein 1e-74 100
ECs4554 NP_312581.1 protein EspB Virulence LEE Protein 1e-74 100
espB ACU09444.1 secreted protein EspB Virulence LEE Protein 1e-74 100
espB AAC31499.1 L0020 Virulence LEE Protein 4e-74 99
unnamed AAL06383.1 EspB Virulence LEE Protein 2e-43 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDCO157_4288 YP_006315154.1 protein EspB VFG0798 Protein 6e-75 100