|
Name : CDCO157_4111 (CDCO157_4111) Accession : YP_006314977.1 Strain : Escherichia coli Xuzhou21 Genome accession: NC_017906 Putative virulence/resistance : Resistance Product : arsenical pump membrane protein Function : - COG functional category : - COG ID : - EC number : - Position : 4310509 - 4311798 bp Length : 1290 bp Strand : + Note : - DNA sequence : ATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATTGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAG TGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTAGTACATCCGGGCGATATTCCGGTGGTGTGGAATATCGTCT GGAACGCGACGGCTGCGTTTATTGCCGTTATTATCATCAGCCTGCTGCTGGATGAGTCCGGCTTTTTTGAATGGGCGGCA CTGCACGTTTCACGCTGGGGCAATGGACGCGGTCGCTTGCTGTTTACCTGGATTGTCCTGCTCGGTGCTGCCGTTGCCGC CCTGTTTGCCAATGATGGCGCGGCGCTTATTTTGACACCGATTGTCATCGCCATGCTGCTGGCTTTAGGGTTCAGTAAAG GCACTACGCTGGCGTTTGTGATGGCGGCCGGATTCATTGCCGATACCGCCAGCCTGCCGCTTATTGTCTCCAACCTGGTG AATATCGTTTCCGCAGATTTCTTTGGCCTCGGCTTTCGCGAATATGCCTCGGTGATGGTGCCGGTGGATATCGCCGCGAT TGTTGCCACGCTGGTGATGTTGCATCTCTATTTCCGCAAAGATATTCCGCAGAACTACGACATGGCGCTGCTGAAATCTC CCGCAGAAGCGATTAAAGATCCTGCTACGTTCAAAACTGGCTGGGTTGTTTTACTGCTTCTGCTGGTGGGATTTTTCGTC CTGGAACCGCTCGGCATTCCGGTCAGCGCCATTGCGGCAGTGGGCGCGTTGATATTATTTGTCGTCGCTAAACGCGGTCA TGCGATTAATACGGGTAAAGTGCTGCGCGGTGCGCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTT ATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGTACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCG ACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGCGCGTTGTC CATTGATGGCAGCACGGCATCTGGCGTTATCAAAGAAGCGATGGTTTATGCCAACGTGATTGGCTGCGATTTGGGGCCGA AAATCACCCCGATTGGTAGCCTGGCAACGCTGCTCTGGCTGCACGTACTTTCGCAGAAGAATATGACTATCAGCTGGGGA TATTACTTCCGTACAGGGATTATCATGACCCTGCCTGTGCTGTTTGTGACGCTGGCTGCGCTGGCGCTACGTCTCTCTTT CACTTTGTAA Protein sequence : MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPGDIPVVWNIVWNATAAFIAVIIISLLLDESGFFEWAA LHVSRWGNGRGRLLFTWIVLLGAAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLV NIVSADFFGLGFREYASVMVPVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAIKDPATFKTGWVVLLLLLVGFFV LEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLADNGLWAA TLGTGFLTAFLSSIMNNMPTVLVGALSIDGSTASGVIKEAMVYANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTISWG YYFRTGIIMTLPVLFVTLAALALRLSFTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 7e-157 | 92 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 1e-95 | 59 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 4e-95 | 59 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 4e-99 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CDCO157_4111 | YP_006314977.1 | arsenical pump membrane protein | BAC0578 | Protein | 3e-161 | 94 |
| CDCO157_4111 | YP_006314977.1 | arsenical pump membrane protein | BAC0576 | Protein | 2e-160 | 94 |
| CDCO157_4111 | YP_006314977.1 | arsenical pump membrane protein | BAC0031 | Protein | 2e-156 | 91 |
| CDCO157_4111 | YP_006314977.1 | arsenical pump membrane protein | BAC0577 | Protein | 5e-155 | 90 |
| CDCO157_4111 | YP_006314977.1 | arsenical pump membrane protein | BAC0575 | Protein | 4e-100 | 60 |
| CDCO157_4111 | YP_006314977.1 | arsenical pump membrane protein | BAC0574 | Protein | 9e-97 | 60 |
