Gene Information

Name : CDCO157_3604 (CDCO157_3604)
Accession : YP_006314470.1
Strain : Escherichia coli Xuzhou21
Genome accession: NC_017906
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3790973 - 3791962 bp
Length : 990 bp
Strand : +
Note : -

DNA sequence :
ATGTTATCTTCATTAAATGTCCTTCAATCCAGCTTCAGAGGAAAGACAGCTTTATCAAATAGTACACTTCTCCAGAAAGT
TTCTTTTGCTGGAAAAGAATATCCTCTGGAACCTATTGATGAAAAAACCCCTATTCTTTTTCAGTGGTTTGAAGCAAGGC
CAGAGCGATACGAAAAAGGAGAAGTACCAATATTGAATACCAAAGAACATCCGTATTTGAGCAATATTATAAATGCTGCA
AAAATAGAAAATGAGCGTATAATCGGTGTGCTGGTAGATGGAAATTTTACTTATGAACAAAAAAAGGAATTTCTCAGTCT
TGAAAATGAATATCAAAATATAAAAATAATCTACCGAGCAGATGTGGATTTCAGCATGTATGATAAAAAACTATCTGATA
TTTACCTTGAAAATATCCATAAACAAGAATCATACCCTGCCAGTGAGAGGGATAATTATCTGTTAGGCTTATTAAGAGAA
GAGTTAAAAAATATCCCAGAAGGTAAGGACTCTTTGATTGAGTCATATGCAGAAAAAAGAGAACATACTTGGTTTGATTT
TTTCAGGAATTTGGCCATGTTGAAGGCTGGAAGTTTGTTTACAGAGACGGGAAAAACTGGATGCCATAACATATCGCCCT
GTAGCGGATGTATATATCTTGATGCCGACATGATTATTACCGATAAATTAGGAGTCCTGTATGCTCCTGATGGTATCGCT
GTGCATGTAGATTGTAATGATGAGATAAAAAGTCTTGAAAATGGTGCGATAGTTGTCAATCGTAGTAATCATCCAGCATT
ACTTGCAGGCCTCGATATTATGAAGAGTAAAGTTGACGCTCATCCATATTATGATGGTCTAGGAAAGGGTATCAAGCGGC
ATTTTAACTATTCATCGTTACACGATTATAATGCTTTTTGTGATTTTATTGAATTTAAGCATGAAAATATTATACCGAAT
ACCAGTATGTATACCTGCAGTTCATGGTAA

Protein sequence :
MLSSLNVLQSSFRGKTALSNSTLLQKVSFAGKEYPLEPIDEKTPILFQWFEARPERYEKGEVPILNTKEHPYLSNIINAA
KIENERIIGVLVDGNFTYEQKKEFLSLENEYQNIKIIYRADVDFSMYDKKLSDIYLENIHKQESYPASERDNYLLGLLRE
ELKNIPEGKDSLIESYAEKREHTWFDFFRNLAMLKAGSLFTETGKTGCHNISPCSGCIYLDADMIITDKLGVLYAPDGIA
VHVDCNDEIKSLENGAIVVNRSNHPALLAGLDIMKSKVDAHPYYDGLGKGIKRHFNYSSLHDYNAFCDFIEFKHENIIPN
TSMYTCSSW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4328 NP_289553.1 hypothetical protein Not tested OI-122 Protein 5e-153 100
unnamed CAI43815.1 hypothetical protein Not tested LEE Protein 3e-152 99
ECO111_3725 YP_003236064.1 T3SS secreted effector NleB Virulence LEE Protein 4e-151 99
nleB1 YP_003223426.1 T3SS effector NleB Virulence LEE Protein 1e-151 99
ECO26_5294 YP_003232174.1 T3SS effector NleB Virulence LEE Protein 4e-152 99
unnamed AAL57565.1 unknown Not tested LEE Protein 3e-152 99
st48 CAC81886.1 ST48 protein Not tested LEE II Protein 3e-152 99