Gene Information

Name : CDCO157_3479 (CDCO157_3479)
Accession : YP_006314346.1
Strain : Escherichia coli Xuzhou21
Genome accession: NC_017906
Putative virulence/resistance : Virulence
Product : surface presentation of antigens protein SpaO
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3653110 - 3654096 bp
Length : 987 bp
Strand : -
Note : -

DNA sequence :
ATGAAGGCAAATTCGAAAACGATCAGAAGGATGAAAGTTAATGTTCGGTCTGAGGAAAGTAAATCGAAACACTCTACGTT
TGAAACCACTTTTCAAAATTGGAAAGAAAATGGCGAAGATGTTGCATTATTAATGCCCGAATTTAGTGCTAAATGGCTAC
CGATAGCAGAAGAGAGTGGCAGCTGGTCTGGATGGGTGTTGCTTCGAGAAATATTTCCCTTAATTTCTGCCGAGCTCGCT
GGGATGGCTTTAATGCCAGAAACGGAAAGGTTAATAGGGGAATGGCTCAGTTTATCCAGTTCCCCGTTAAATCTAAAGTA
TCCTGAACTAAAATATAATCGTTTGTGCGTAGGTAAAGTATTTGATGGAGTATTGAGTCCAGCTCAACCACTGATAAGAA
TATGGACAGGGGAATTGAATCTTTGGTTAGATAAAGTCACAGTCTGCCAATACGAAAACGCTCCAACTTTAGACAAAAAA
TCATTATATTGGCCCATTCATTTTGTAATTGGATTTAGTAAAACATGTTATAGAACTATTGTTGATATTGAAGTCGGTGA
TGTTTTATTAATCTCAAATAATATGGCTTATGCGGTTATTTATAATACAAAGATTTGTGATTTAATTTATCCAGAGGAGT
TAAAAATGGCTGATCATTTTCAGTACGAGGAAGATTTTGAAACAGATGACTTTGATATCAAAAAAAGCGAGAGTGAGATT
TATGATGAAAATGACGAACAGATGATTAATAGTTTTGAAGAGTTGCCTGTAAAAATTGAGTTTGTTCTTGGTAAGAAAAT
AATGAATCTATATGAAATAGACGAGCTCTGTGCAAAAAGAATAATATCTCTGCTTCCTGAATCTGAGAAAAATATAGAGA
TACGTGTAAATGGCGCGCTAACTGGCTATGGCGAACTTGTTGAAGTGGATGATAAATTGGGCGTAGAGATTCATTCTTGG
TTATCAGGGCATAATAATGTCAAATAG

Protein sequence :
MKANSKTIRRMKVNVRSEESKSKHSTFETTFQNWKENGEDVALLMPEFSAKWLPIAEESGSWSGWVLLREIFPLISAELA
GMALMPETERLIGEWLSLSSSPLNLKYPELKYNRLCVGKVFDGVLSPAQPLIRIWTGELNLWLDKVTVCQYENAPTLDKK
SLYWPIHFVIGFSKTCYRTIVDIEVGDVLLISNNMAYAVIYNTKICDLIYPEELKMADHFQYEEDFETDDFDIKKSESEI
YDENDEQMINSFEELPVKIEFVLGKKIMNLYEIDELCAKRIISLLPESEKNIEIRVNGALTGYGELVEVDDKLGVEIHSW
LSGHNNVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs3726 NP_311753.1 surface presentation of antigens protein SpaO Not tested LIM Protein 2e-150 100
epaO AAZ31294.1 EpaO Virulence ETT2 Protein 2e-128 93