Gene Information

Name : CDCO157_3460 (CDCO157_3460)
Accession : YP_006314327.1
Strain : Escherichia coli Xuzhou21
Genome accession: NC_017906
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3639159 - 3639638 bp
Length : 480 bp
Strand : +
Note : -

DNA sequence : 
TTGATTATAAAAAAAAACTTATTATTTATTTTAGTTTTTATCAGTGGGTTTATTCTCTTCACTGTCTATTCTTACACTGC
AGAAAAAATGATATATAACGAAACATGCACTGCAAATTGGGTAATTTTTAATGACCAGGGACGAGCAAATCTTACCATAG
ACTTTATGTATAACAAAAAAAATAAAACAGGAACTGTTGCGTTGAGTGGAACCTGGCAACAAGGTAACAGAGAAAGTAAA
TCAATACGGCGAAATATTGAATACACATGGGTTGAAAACTATGACACAGCCCATTTAACATCAAAGAAAGTTAATAAGTT
TGAGATTATGGATCAAGTCGATGATGATAGACTTGCAGAACTTATTCCTGATTTTTATGTCTTTCCAGAAAAAAGTGTAA
GCTATAATATACTAAAGCAAGGTAAGCATGCTTTTATTTTGAGCATTGGTAACAGAGCAATAATGCATTGTGCAAGGTAA

Protein sequence : 
MIIKKNLLFILVFISGFILFTVYSYTAEKMIYNETCTANWVIFNDQGRANLTIDFMYNKKNKTGTVALSGTWQQGNRESK
SIRRNIEYTWVENYDTAHLTSKKVNKFEIMDQVDDDRLAELIPDFYVFPEKSVSYNILKQGKHAFILSIGNRAIMHCAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs3705 NP_311732.1 hypothetical protein Not tested LIM Protein 2e-70 100
fidL NP_462657.1 inner membrane protein Virulence SPI-3 Protein 6e-25 43
fidL AAD16955.1 FidL Virulence SPI-3 Protein 4e-25 43
fidL NP_458173.1 putative exported protein Virulence SPI-3 Protein 5e-25 42
fidL YP_218666.1 inner membrane protein Virulence SPI-3 Protein 4e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDCO157_3460 YP_006314327.1 hypothetical protein VFG0569 Protein 2e-25 43