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Name : gabD (CDCO157_3283) Accession : YP_006314150.1 Strain : Escherichia coli Xuzhou21 Genome accession: NC_017906 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I Function : - COG functional category : - COG ID : - EC number : - Position : 3441125 - 3442573 bp Length : 1449 bp Strand : + Note : - DNA sequence : ATGAAACTGAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGT CATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCTGATGAAACTCGCGCCGCTA TCGACGCCGCCAACCGCGCCCTGCCCGTCTGGCGTGCGCTCACCGCCAAAGAACGCGCCAACATTCTGCGCAACTGGTTC AATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCGCTGGCTGAAGCGAAAGG CGAAATCAGCTACGCCGCCTCTTTTATTGAGTGGTTTGCCGAAGAAGGCAAACGCATTTATGGCGACACCATTCCCGGTC ATCAGGCCGATAAGCGCCTGATTGTGATCAAGCAGCCGATTGGCGTTACAGCGGCCATCACGCCGTGGAACTTTCCGGCG GCAATGATTACCCGCAAAGCCGGTCCGGCGCTGGCGGCAGGCTGCACCATGGTGCTGAAGCCCGCCAGTCAGACGCCGTT CTCTGCGCTGGCGCTGGCGGAGCTGGCGATCCGCGCGGGCATTCCGGCTGGCGTGTTTAACGTGGTCACCGGTTCGGCGG GCGCGGTGGGTAATGAACTGACCAGCAACCCGCTGGTACGCAAACTGTCGTTTACCGGCTCGACCGAAATTGGCCGCCAG TTAATGGAACAGTGCGCGAAAGACATCAAAAAAGTGTCGCTGGAGCTGGGCGGCAACGCGCCGTTTATCGTCTTTGACGA TGCCGATCTCGATAAAGCCGTGGAAGGCGCACTGGCCTCGAAATTCCGCAACGCCGGGCAAACCTGCGTCTGCGCCAACC GTTTATACGTGCAGGACGGCGTGTATGACCGCTTTGCCGAAAAATTGCAGCAGGCGGTGAGCAAACTGCATATCGGCGAC GGGCTGGATAAAGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGC GCTGGAAAAAGGCGCGCGCGTAGTTTGCGGCGGTAAAGCACATGAACGCGGCGGCAACTTCTTCCAGCCCACCATTCTGG TGGACGTGCCGGCCAACGCCAAAGTGTCGAAAGAAGAGACCTTCGGCCCCCTCGCCCCGCTGTTCCGTTTTAAAGATGAA GCCGATGTGATCGCGCAAGCCAATGACACCGAGTTTGGCCTTGCCGCCTATTTCTATGCCCGTGATTTAAGTCGCGTCTT CCGCGTGGGCGAGGCGCTGGAGTACGGCATCGTCGGCATCAATACCGGGATTATTTCCAATGAAGTGGCCCCGTTCGGCG GCATTAAAGCCTCGGGTCTGGGTCGTGAAGGTTCGAAGTATGGCATCGAAGATTACTTAGAAATCAAATATATGTGCATC GGTCTTTAA Protein sequence : MKLNDSNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPVWRALTAKERANILRNWF NLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGD GLDKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDE ADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI GL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-158 | 67 |
