Gene Information

Name : CDCO157_3275 (CDCO157_3275)
Accession : YP_006314142.1
Strain : Escherichia coli Xuzhou21
Genome accession: NC_017906
Putative virulence/resistance : Virulence
Product : putative DNA binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3426405 - 3426611 bp
Length : 207 bp
Strand : -
Note : -

DNA sequence :
ATGAATCAGCACAACACCCGCCTTATTCGTTTACCAGAGGTTCTGCATCGAACTGGATACGGTAAAGCTTGGATCTATCA
CCTCATCAACCAAAATCGTTTTCCTTCCCCCGTTAAAATCGGTGCGCGCTCTGTTGCTTTCATTGAAAGTGAAGTAGACG
AATGGATTCAATTAACTATCGAAAATTCAAGAAAGCATGTTGCCTGA

Protein sequence :
MNQHNTRLIRLPEVLHRTGYGKAWIYHLINQNRFPSPVKIGARSVAFIESEVDEWIQLTIENSRKHVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 1e-10 47
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 2e-10 46
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 2e-10 46
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 3e-05 43
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 3e-06 42
unnamed CAA21398.1 - Not tested HPI Protein 5e-06 42
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 4e-06 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDCO157_3275 YP_006314142.1 putative DNA binding protein VFG1141 Protein 6e-11 46