Gene Information

Name : CDCO157_1745A (CDCO157_1745A)
Accession : YP_006312612.1
Strain : Escherichia coli Xuzhou21
Genome accession: NC_017906
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1811076 - 1811456 bp
Length : 381 bp
Strand : -
Note : -

DNA sequence :
ATGCAGAAAAATGTGACTCCCGGCAGGCGAAAAGGCTGCCCTAATTATCCTCCCGAATTTAAACAGCAGCTCGTTGCTGC
CTCCTGTGAACCCGGGATATCCATCTCAAAACTTGCTCTTGAAAATGGCATTAACGCAAATCTGTTGTTCAAATGGCGAC
AACAATGGCGCGAGGGAAAGCTGCTATTACCTTCTTCAGAGAGCCCCCAGCTACTTCCTGTGACTCTCGATGCAGCTGCC
GAACAGCCAGAATCGCTCGCAGAGGACCCGGAAACCCTCAGTATCAGCTGTGAGGTAACGTTCCGGCACGGGACGCTCCG
CTTCAATGGCAATGTCAGCGAAAAGCTCCTGACTCTGCTGATACAGGAACTGAAGCGATGA

Protein sequence :
MQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWREGKLLLPSSESPQLLPVTLDAAA
EQPESLAEDPETLSISCEVTFRHGTLRFNGNVSEKLLTLLIQELKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL99257.1 unknown Not tested LEE Protein 6e-47 100
unnamed ACU09437.1 IS66 family element orf1 Not tested LEE Protein 6e-47 100
Z5096 NP_290247.1 prophage-associated protein Not tested LEE Protein 5e-47 100
ECs4545 NP_312572.1 hypothetical protein Not tested LEE Protein 5e-47 100
unnamed AAC31492.1 L0013 Not tested LEE Protein 3e-47 100
c3577 NP_755452.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-47 100
l0013 CAD33777.1 L0013 protein Not tested PAI I 536 Protein 9e-47 99
unnamed AAL08462.1 unknown Not tested SRL Protein 2e-46 99
c3560 NP_755435.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-24 54
ECUMN_3326 YP_002414006.1 putative transposase Not tested Not named Protein 3e-24 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDCO157_1745A YP_006312612.1 hypothetical protein VFG0791 Protein 1e-47 100
CDCO157_1745A YP_006312612.1 hypothetical protein VFG1708 Protein 1e-47 100
CDCO157_1745A YP_006312612.1 hypothetical protein VFG1518 Protein 3e-47 99
CDCO157_1745A YP_006312612.1 hypothetical protein VFG1053 Protein 7e-47 99
CDCO157_1745A YP_006312612.1 hypothetical protein VFG1697 Protein 8e-25 54