Gene Information

Name : CDCO157_1345 (CDCO157_1345)
Accession : YP_006312216.1
Strain : Escherichia coli Xuzhou21
Genome accession: NC_017906
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1457650 - 1458492 bp
Length : 843 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGATATCACAATCTCCCGTCCGGAAGTGGTCAACGGGCATACGGACGTTATCTGCTCAACCAGCATTCGCCACAT
TCTGGCTGTACGAAAGAGTACACTGTTGCAAATCGACACACTTATCCGACAACTGGCTGAAATCTCGGTGCTGACGGAAA
GCATCGGAGGTAAAACTGCCCCGGACTGGGCCATGAAACAGGATTTTCGCTGCGGCTGCTGGCTGATGGAGAAACCCGAA
ACAGCAATGAAAGCCATTACCCGGAATCTTGATCGCGAAATCTGGCGTGACCTGATGCAACGTTCCGGGATGCTGTCATT
AATGGATACGCAGGCCCGTGATACATGGTACCGGTCACTGGAGTACGATAATTTTCCGGAAATCAGCGAAGCGAACATTC
TGAGCACATTTGAACAACTGCACCAGAATAAGGATGAGGTGTTTGAGCGAGGGGTGATCAACGTCTTCAGAGGGCTGAAC
TGGAATTACAAAACCAATTGCCCCTGTAAATTTGGCAGTAAAATTATCGTCAACAATCTGGTGAGATGGGACCGGTGGGG
ATTTCATCTTATCACCGGACAACAGGCTGACCGACTCGCCGATCTGGAAAGAATGTTGCACCTGTTCAGCGGTAAACCAA
TCCCCGACAACCGGGGAAACATCACCCTTCGTCTGGATGATCACATTCAGTCTGTTCAGGGTAAAGAGAGCTATGAAGAT
GAGATGTTCAGCATCAGATACTTTAAGAAGGGCTCCGCGCATATCACGTTCAGAAAACCAGAACTGGTTGACAGACTGAA
TGATATTATCGCAAAACACTATCCTGATATGCTGGCAGTATAG

Protein sequence :
MSDITISRPEVVNGHTDVICSTSIRHILAVRKSTLLQIDTLIRQLAEISVLTESIGGKTAPDWAMKQDFRCGCWLMEKPE
TAMKAITRNLDREIWRDLMQRSGMLSLMDTQARDTWYRSLEYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFRGLN
WNYKTNCPCKFGSKIIVNNLVRWDRWGFHLITGQQADRLADLERMLHLFSGKPIPDNRGNITLRLDDHIQSVQGKESYED
EMFSIRYFKKGSAHITFRKPELVDRLNDIIAKHYPDMLAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 4e-131 100
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 4e-131 100
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 9e-126 95
unnamed AAL57572.1 unknown Not tested LEE Protein 2e-125 94
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 3e-124 94
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 3e-124 92
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 4e-123 91
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 6e-121 90
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-121 90
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 1e-122 90
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-121 90
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 9e-120 88
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 1e-119 88
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 1e-119 88
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 4e-109 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDCO157_1345 YP_006312216.1 hypothetical protein VFG1533 Protein 5e-126 95
CDCO157_1345 YP_006312216.1 hypothetical protein VFG0666 Protein 5e-120 88
CDCO157_1345 YP_006312216.1 hypothetical protein VFG1685 Protein 2e-109 88