Gene Information

Name : CDCO157_1261 (CDCO157_1261)
Accession : YP_006312133.1
Strain : Escherichia coli Xuzhou21
Genome accession: NC_017906
Putative virulence/resistance : Resistance
Product : putative outer membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1389927 - 1391213 bp
Length : 1287 bp
Strand : -
Note : -

DNA sequence :
ATGACATCATATTTCAATATGTCTGTTGTACTGTGGTTTTTATTTACGGGTATACTTCCATGTGGACTATTGTTGTTAGT
AAATATCCGTTATCCTGAGACATGGATAAAGGGTATTACATATCGTTTAATATCAATGTTTGCATCTCTCTTGATTATAT
TTGCGATTGCGTTTTTCTTTTATAAGGATTATGCATCAGTTGGCAGAAACAACTCTTCATTAAATAAAGAAATAATACCT
ACTAATTATATCTACAGTGGGTTTAAATATGTAAGGGATTTTTTTGTTTCTCCTGGCGAGTTTCGTCAGACTGGAACGGA
TGCATCCCGCACAATAAATGAAAAACAAAAGCCGGTAATTATGTTTTTAGTTGTCGGGGAGACAGCAAGAAGTCAAAACT
ATGCTCTGAATGGATATTCTCGTGGTACCAATGATTTTACAAAGAAATATAATGAACTTATATCCTTTCATAATGTGCAG
TCGTGTGGCACATCCACAGCCATATCTGTTCCATGCATGTTTTCAGATATGAAGCGAAAAGAGTTCAATTCCCGCAAAGC
GGTAAATTCGGAAAATGTACTGGATATTCTGTACAGAACGGGGGTAAATTTACTCTGGATTGAAAATGACGGGGGATGTA
AAGGTGTATGTAAGCGAATCCCTACAATTAATATTGAGCCATCAAATTCAGATAATACATTATGCAAGAAAAACTCATGT
TATGATGAGGTTATGCTAAAAAATATTGATGAGTATATAAATAATAACTCAGAGGATAAACTTATCGTATTTCATTTGAT
GGGTAGTCATGGTCCTACCTACTATCTCCGTTATCCTGAGTCACATAAATATTTTAAACCAACATGTGATCGTAGTGATA
TCGAAAATTGTACGCATGAGCAATTGATTAATACCTATGATAATACAATTCGCTATACTGATTATATAATATCAAAATTA
ATTGACAAGCTTATCGAATATAAAGATGAGTATGATACTGTTTTATTATATGTCTCTGACCATGGAGAATCTCTGGGAGA
AAATGGATTATACTTACATGGAACACCATATAATGTTGCTCCAGCTGAGCAAACGCATGTGCCTCTTATTACCTGGATGT
CTCCGGGGTTCGTTTCCTCTAAAAAAATTGATTTGAATTGTTTGTCAGAACATGCTCTAAACAGAACAGTAAGTCATGAT
AATATATTTTCATCGTTACTGGGGTTATGGAATGTAAATACTTCAGTTTATAATAAAGAAGATGATATTATATCCTCCTG
CAGATAG

Protein sequence :
MTSYFNMSVVLWFLFTGILPCGLLLLVNIRYPETWIKGITYRLISMFASLLIIFAIAFFFYKDYASVGRNNSSLNKEIIP
TNYIYSGFKYVRDFFVSPGEFRQTGTDASRTINEKQKPVIMFLVVGETARSQNYALNGYSRGTNDFTKKYNELISFHNVQ
SCGTSTAISVPCMFSDMKRKEFNSRKAVNSENVLDILYRTGVNLLWIENDGGCKGVCKRIPTINIEPSNSDNTLCKKNSC
YDEVMLKNIDEYINNNSEDKLIVFHLMGSHGPTYYLRYPESHKYFKPTCDRSDIENCTHEQLINTYDNTIRYTDYIISKL
IDKLIEYKDEYDTVLLYVSDHGESLGENGLYLHGTPYNVAPAEQTHVPLITWMSPGFVSSKKIDLNCLSEHALNRTVSHD
NIFSSLLGLWNVNTSVYNKEDDIISSCR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 0.0 100
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 0.0 100

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDCO157_1261 YP_006312133.1 putative outer membrane protein BAC0485 Protein 3e-86 44