Gene Information

Name : CDCO157_1251 (CDCO157_1251)
Accession : YP_006312121.1
Strain : Escherichia coli Xuzhou21
Genome accession: NC_017906
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1380032 - 1380595 bp
Length : 564 bp
Strand : +
Note : -

DNA sequence : 
ATGTATAATGCTAATCCCAATTACGAAATGGACTTCATGATTCTGAAAGACGTGAATGAACACATGGAAGGTCTGTTTCA
ACGTTTTTCTAAACTGTTACCTTTCAGAATTGATTTTGCCTACAGGAAAGACACGCCCAGTTTTGGTCATTCCTGTAGGC
ACAGTATGTGTATTGAAATGCACCGCTTACTTAGTGAAACCCAAACGATGCTGGCGGGATATTACTGGGTAATGGAATAT
ACGTCAAACAAGGGACTTCATATTCATTTTATCGGCTACCTGGATGGGCAACGTCACAACAAATCTTATCGGATATCCAG
GCAACTGGGAGATATCTGGAGGCGGATCACGGAAGGGGAGGGTTATTTTCACCTGTGCAGGGCTAAAGACAAATACCCGG
TGCGTATCGATCACGTAATTCACTATAGTGATAAATCTGCGGTAGACGACTTACGTTACGCCCTTAGCTATCTGGCCAAA
CAGGATCAGAAAGAACACGGTATTATTCTGAGGCGTAGCAGGCTTCCCGAAAAAAGTAACCGGGGCCGACCACGACATAA
CTGA

Protein sequence : 
MYNANPNYEMDFMILKDVNEHMEGLFQRFSKLLPFRIDFAYRKDTPSFGHSCRHSMCIEMHRLLSETQTMLAGYYWVMEY
TSNKGLHIHFIGYLDGQRHNKSYRISRQLGDIWRRITEGEGYFHLCRAKDKYPVRIDHVIHYSDKSAVDDLRYALSYLAK
QDQKEHGIILRRSRLPEKSNRGRPRHN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1128 NP_286663.1 hypothetical protein Not tested TAI Protein 1e-87 100
Z1567 NP_287071.1 hypothetical protein Not tested TAI Protein 1e-87 100
unnamed AAL08430.1 unknown Not tested SRL Protein 5e-82 93
unnamed CAE85184.1 hypothetical protein Not tested PAI V 536 Protein 5e-57 64
SF2982 NP_708756.1 hypothetical protein Not tested SHI-1 Protein 9e-58 64
S3187 NP_838470.1 hypothetical protein Not tested SHI-1 Protein 9e-58 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDCO157_1251 YP_006312121.1 hypothetical protein VFG1021 Protein 2e-82 93
CDCO157_1251 YP_006312121.1 hypothetical protein VFG0646 Protein 3e-58 64