Gene Information

Name : clpE (Spaf_0595)
Accession : YP_006309417.1
Strain : Streptococcus parasanguinis FW213
Genome accession: NC_017905
Putative virulence/resistance : Virulence
Product : ATP dependent protease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 612958 - 615222 bp
Length : 2265 bp
Strand : -
Note : -

DNA sequence :
ATGTATATGCTTTGTCAAAATTGTAAAATAAATGAATCAACCATCCATTTATATACAAATGTAAATGGACGTCAGCAGCA
AGTAGACCTCTGTCAAAATTGCTATAAAATTATGAAAACAGACCCAAATAACAGCTTCTTGAAAGGCATGACCCAACGGA
GCCAACTCACTGGAGATCCTTTTGAAGATTTCTTCAATAACCTTGGAAACTTCCAAAGTCCGCAAGAACCTCAAACCCCT
CCAACTCAATCCGGAGGCAGTTATGGAGGTGGCGGCTACGGCCAAAACAATAACCGTGGTGGTGGTCAAGACCCTCGTCA
AGCACGCCCTCAAAAGCCAAAAGGGCTGTTAGAAGAGTTCGGCATCAATGTCACAGAGATTGCCCGCAAAGGAGATATTG
ACCCTGTCATTGGCCGTGACGAGGAGATTATCCGTGTCATCGAAATTCTCAACCGTCGAACCAAGAACAACCCGGTTCTG
ATTGGAGAGCCTGGGGTCGGAAAAACTGCCGTTGTGGAAGGCCTGGCTCAAAAAATCGTCGATGGCGACGTTCCACATAA
ATTGCAAGGAAAAGAAGTCATCCGCCTAGATGTCGTCAGCCTCGTTCAGGGCACAGGCATTCGTGGTCAATTCGAAGAAC
GCATGCAAAAATTAATGGATGAAATTCGTCAACGCGAAGATGTTATTCTGTTCATCGACGAAATCCATGAAATTGTTGGT
GCAGGATCAGCTGGCGAAGGCAATATGGACGCTGGAAATATCCTCAAACCAGCCTTAGCGCGCGGTGAACTCCAATTAGT
CGGTGCTACTACCCTCAATGAATACCGTATCATTGAAAAAGATGCGGCCTTGGAACGTCGGATGCAGCCCGTTAAGGTCG
ATGAACCAACGGTTGAAGAAACCATCACCATCCTCAAGGGTATCCAGAAAAAATACGAAGACTACCACCACGTCCACTAT
ACAGACGGAGCTATCGAAGCAGCAGCTATTCTTTCAAACCGCTACATCCAAGATCGCTTCCTGCCAGACAAGGCCATTGA
TTTGTTGGATGAAGCCGGTTCTAAAATGAACCTGACTCTGAACTTTGTGGATCCAAAAGTGATTGATCAGCGCTTGATTG
AAGCTGAAAACCTCAAAGCTCAAGCGACGCGCGAAGAAGACTTTGAAAAAGCAGCCTACTTCCGTGACCAAATCGCGAAA
TACAAGGAAATGCAAGGTCAACATGTCACTGATCAGGAGACCCCTGTCATCAGTGAAAAAACGATTGAACACATCGTTGA
ACAAAAGACTAATATTCCTGTTGGCGATTTGAAAGAAAAAGAACAGTCTCAATTGATCAATCTGGCTTCTGATTTGAAAG
CTCATGTGATCGGTCAAGATGATGCAGTAGATAAAATTGCAAAAGCCATTCGACGCAATCGTGTCGGCCTAGGATCGCCT
AACCGTCCGATCGGAAGCTTCCTCTTTGTCGGACCAACCGGTGTCGGGAAGACCGAACTGTCTAAACAATTGGCGATCGA
GCTCTTTGGCTCTGCAGATAATATGATCCGCTTTGATATGAGCGAATACATGGAAAAACATAGCGTAGCGAAACTAGTCG
GAGCTCCTCCGGGCTATGTTGGCTATGATGAAGCTGGACAACTAACTGAAAAAGTCCGTCGCAATCCTTACTCCCTCGTG
TTGTTGGATGAAGTGGAAAAAGCCCATCCAGACGTCATGCACATGTTCTTGCAAGTCTTGGATGATGGCCGTTTGACAGA
TGGTCAAGGCTGTACCGTCAGCTTTAAAGATACCATTATCATCATGACCTCTAATGCTGGAACCGGCAAGGCTGAGGCCA
ATGTTGGTTTTGGAGCTGCTCGCGAAGGTCGAACCAACTCTGTACTTGGGGAACTCGGTAACTTCTTTAGCCCTGAATTC
ATGAACCGTTTTGATGGCATCATTGAATTCCAACCTCTATCAAAAGAAAAGCTTCTTCAAATCGTTACCCTCATGCTGGA
TGAAGTCAATCAACGTCTCGCACAAAATGAGATTCATCTGGATGTGACAGAGAAGGTCAAAGAAAAGTTGGTCGATCTAG
GATACGATCCAAAAATGGGGGCCCGCCCACTCCGTCGTACCATCCAAGACCATATCGAAGATGCCATTACCGATTATTAC
TTGGAACATCCAAGTGAGAAACAACTCAAAGCAGTCATGACCAGCAATGGGAATATTAGCATCAAAGCTGTTCACAAAAC
GGCCGAAAAGAAGTCAGAAGCATAA

Protein sequence :
MYMLCQNCKINESTIHLYTNVNGRQQQVDLCQNCYKIMKTDPNNSFLKGMTQRSQLTGDPFEDFFNNLGNFQSPQEPQTP
PTQSGGSYGGGGYGQNNNRGGGQDPRQARPQKPKGLLEEFGINVTEIARKGDIDPVIGRDEEIIRVIEILNRRTKNNPVL
IGEPGVGKTAVVEGLAQKIVDGDVPHKLQGKEVIRLDVVSLVQGTGIRGQFEERMQKLMDEIRQREDVILFIDEIHEIVG
AGSAGEGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILKGIQKKYEDYHHVHY
TDGAIEAAAILSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKAQATREEDFEKAAYFRDQIAK
YKEMQGQHVTDQETPVISEKTIEHIVEQKTNIPVGDLKEKEQSQLINLASDLKAHVIGQDDAVDKIAKAIRRNRVGLGSP
NRPIGSFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLV
LLDEVEKAHPDVMHMFLQVLDDGRLTDGQGCTVSFKDTIIIMTSNAGTGKAEANVGFGAAREGRTNSVLGELGNFFSPEF
MNRFDGIIEFQPLSKEKLLQIVTLMLDEVNQRLAQNEIHLDVTEKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDYY
LEHPSEKQLKAVMTSNGNISIKAVHKTAEKKSEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 5e-152 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpE YP_006309417.1 ATP dependent protease VFG0080 Protein 0.0 58
clpE YP_006309417.1 ATP dependent protease VFG0079 Protein 2e-161 55