Gene Information

Name : clpL (Spaf_0388)
Accession : YP_006309216.1
Strain : Streptococcus parasanguinis FW213
Genome accession: NC_017905
Putative virulence/resistance : Virulence
Product : ATP-binding subunit of Clp protease and DnaK/DnaJ chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 397640 - 399769 bp
Length : 2130 bp
Strand : +
Note : -

DNA sequence :
ATGAATAACAACTTTAACAATATGGATGATCTTTTCAATCAACTAATGGGAAATATGGGTGGTTTTCGTTCTGAAAGCCG
TCGCTACATGATCAACGGTCGTGAAGTGACACCAGAAGAATTTGCTATCTACCGTCAAACTGGTCAACTTCCAAATGAAG
GAAGCGAGCAAGTGCAACACCATCAAGGTAAAGGAATGAAACAAGATGGGATCCTTGCAAAACTTGGTCGTAACTTGACC
GAAGAAGCTCGTGAAGGAAAATTGGATCCAGTCATCGGACGTAATAAAGAAATTCAAGAAACTGCTGAAATCTTGTCTCG
TCGTACCAAGAACAACCCTGTCCTTGTAGGGGATGCCGGTGTTGGTAAAACAGCAGTTGTAGAAGGTTTGGCACAAGCTA
TTGTGAACGGGGATGTTCCAGCTGCTATCAAGAACAAAGAAATCATCTCAATTGATATTTCTGGTCTAGAAGCTGGTACG
CAATACCGTGGTAGCTTTGAAGAAAATATTCAAAATCTGATCCAAGAAGTCAAAGCTATGGGAAATGTCATTCTCTTCTT
TGATGAAATCCATCAAATCCTTGGTGCAGGTAGCACAGGTGATGGTCAAGGATCTAAAGGTCTTGCGGATATCATTAAAC
CTGCTCTTTCACGTGGGGAATTGACAGTCATTGGGGCAACTACTCAAGATGAATACCGTAACACCATCTTGAAGAATGCG
GCTCTTGCTCGTCGTTTCAACGAAGTGAAAGTCAATGCTCCTTCTGCTGAAGATACTTTCAAGATTCTCCAAGGGATCCG
TGATCTTTATGAAAAACACCACAATGTCATCTTGCCAGATGAAGTTTTGAAGGCAGCAGTTGATTATTCAATCCAATACA
TTCCACAACGTAGCTTGCCTGATAAGGCCATTGACTTGGTCGATGTGACAGCTGCTCACTTGGCAGCCCAACATCCAGTA
ACAGATGTCCATGCTGTGGAACATGAAATTGAAGAAGAAAAAACCAAACAAGAAGAAGCTGCTGCTAAAGAAGATTACGA
AGTAGCTTTGAAAGCAAAAGTTCGTATCGAAGAACTTGAAAAGAAAATTGCCAACCACACAGAAGACCATAAGGTAACAG
CAACAATCAACGATGTGGCTGAATCTGTAGAACGGATGACGGGTATTCCAGTTTCTCAAATGGGTGCAACCGATATCGAA
CGTTTGAAAGATATGGGTCACCGTTTGCAAACTAAGGTTATCGGTCAAGATAAAGCCGTTGAAGCAGTGGCACGTGCTAT
CCGTCGGAACCGTGCAGGATTTGACGAAGGTAACCGTCCAATCGGTAGCTTCCTCTTTGTAGGTCCTACTGGTGTCGGTA
AGACTGAGTTGGCTAAACAATTGGCTCTTGATATGTTCGGAACCAAAGATGCGATCATCCGTTTGGACATGTCAGAATAC
AGCGACCGTACAGCCGTTTCTAAATTGATTGGTACGACAGCTGGTTATGTTGGATATGATGACAATAGCAATACCTTAAC
AGAACGTGTTCGCCGTAACCCATACTCAATCGTTCTTCTTGACGAAATTGAAAAGGCGGATCCTCAAGTGATCACCCTTC
TCCTTCAAGTCTTGGATGATGGTCGTTTGACAGATGGTCAAGGGAACACGGTCAACTTCAAGAACACTGTGATTATCGCT
ACTTCAAACGCTGGCTTTGGTTACGAAGCCAACTTGACAGAAGATGCGGATAAACCAGAACTCATGGATCGTTTGAAACC
TTACTTCCGTCCAGAATTCCTCAATCGTTTCAACGCTGTCATTGAATTCTCACACTTGAGCAAGGAAGACCTTTCTAAGA
TTGTCGATTTGATGTTGGTAGATGTCAATAAGACCCTTTCTAAGAAGGAAATCGATTTGGCAGTGAGCGATGCAGCCAAA
GAATATATGACTGAAGAAGGTTATGATGAAGTGATGGGTGTTCGTCCACTCCGTCGGGTAGTTGAACAACAAATCCGTGA
CAAAGTCACAGACTTCCACTTGGATAATTTGGATGCCAAACATCTTGAAGCTGACATGCAAGATGGTGTACTTGTGATCA
GAGAAAAAGATACCAAGAAAGAAGAAAATACGGATAAAGAAGCAGAATAA

Protein sequence :
MNNNFNNMDDLFNQLMGNMGGFRSESRRYMINGREVTPEEFAIYRQTGQLPNEGSEQVQHHQGKGMKQDGILAKLGRNLT
EEAREGKLDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEAGT
QYRGSFEENIQNLIQEVKAMGNVILFFDEIHQILGAGSTGDGQGSKGLADIIKPALSRGELTVIGATTQDEYRNTILKNA
ALARRFNEVKVNAPSAEDTFKILQGIRDLYEKHHNVILPDEVLKAAVDYSIQYIPQRSLPDKAIDLVDVTAAHLAAQHPV
TDVHAVEHEIEEEKTKQEEAAAKEDYEVALKAKVRIEELEKKIANHTEDHKVTATINDVAESVERMTGIPVSQMGATDIE
RLKDMGHRLQTKVIGQDKAVEAVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAIIRLDMSEY
SDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIVLLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFKNTVIIA
TSNAGFGYEANLTEDADKPELMDRLKPYFRPEFLNRFNAVIEFSHLSKEDLSKIVDLMLVDVNKTLSKKEIDLAVSDAAK
EYMTEEGYDEVMGVRPLRRVVEQQIRDKVTDFHLDNLDAKHLEADMQDGVLVIREKDTKKEENTDKEAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 5e-132 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpL YP_006309216.1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperone VFG0080 Protein 3e-147 48
clpL YP_006309216.1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperone VFG0079 Protein 2e-135 45