Gene Information

Name : fimA (Spaf_0347)
Accession : YP_006309177.1
Strain : Streptococcus parasanguinis FW213
Genome accession: NC_017905
Putative virulence/resistance : Virulence
Product : zinc/manganese ABC transporter binding protein, FimA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 355827 - 356756 bp
Length : 930 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAAATCGCTTCTGTCCTCGCCCTCTTTGTGGCACTCTTATTCGGTCTTCTAGCCTGTAGCAAGGGGTCTTCTTC
TGGAGCTTCTGGTAAATTGAAAGTGGTCACCACCAATTCGATCCTTGCAGATATCACCAAAAATATTGCTGGGGATAAGA
TCGAGCTCCACAGTATCGTTCCCGTCGGCAAAGATCCCCACGAATACGAACCGCTACCAGAAGATGTCAAAAAAACTTCA
CAAGCAGACCTGATCTTCTACAACGGGATCAACCTTGAAACTGGTGGCAATGCTTGGTTCACTAAATTGGTCAAAAATGC
CAATAAAGTAGAAAACAAGGACTATTTCGCAGTGAGCGAGGGAGTCGACGTCATCTACCTAGAAGGCCAAAACCAAGCGG
GAAAAGAAGACCCACACGCTTGGCTCAATCTCGAAAACGGGATCCTCTACGCTAAAAACATTGCCAAACAATTGATCGCC
AAAGATCCGAAAAACAAGGACTTCTACGAAAAAAATCTAGCAGCCTACACTGAAAAACTCAGCAAGCTAGACCAAAAAGC
CAAACAAGCATTCAAGAATATCCCAGAAGACAAGAAGATGATCGTAACCAGCGAAGGTTGCTTCAAGTACTTCTCCAAAG
CCTATGGCGTCCCATCTGCCTATATCTGGGAAATCAATACCGAAGAAGAAGGGACACCCGAACAAATCAAAACACTGGTA
GAGAAATTGCGTCAAACCAAGGTGCCGGCCCTCTTTGTTGAATCCAGCGTTGATGAGCGTCCCATGAAAACTGTAGCTAA
AGATACCAATATTCCGATCTATGCAAAGATCTTCACTGATTCCATTGCCAAAGAAGGAGAAAAGGGCGATAGCTACTACA
GCATGATGAAGTGGAACTTAGACAAGATCGCAGAAGGATTGAGTCAGTAA

Protein sequence : 
MKKIASVLALFVALLFGLLACSKGSSSGASGKLKVVTTNSILADITKNIAGDKIELHSIVPVGKDPHEYEPLPEDVKKTS
QADLIFYNGINLETGGNAWFTKLVKNANKVENKDYFAVSEGVDVIYLEGQNQAGKEDPHAWLNLENGILYAKNIAKQLIA
KDPKNKDFYEKNLAAYTEKLSKLDQKAKQAFKNIPEDKKMIVTSEGCFKYFSKAYGVPSAYIWEINTEEEGTPEQIKTLV
EKLRQTKVPALFVESSVDERPMKTVAKDTNIPIYAKIFTDSIAKEGEKGDSYYSMMKWNLDKIAEGLSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 2e-105 82
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 3e-105 82

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fimA YP_006309177.1 zinc/manganese ABC transporter binding protein, FimA VFG1359 Protein 1e-109 84
fimA YP_006309177.1 zinc/manganese ABC transporter binding protein, FimA VFG2165 Protein 5e-88 64
fimA YP_006309177.1 zinc/manganese ABC transporter binding protein, FimA VFG2157 Protein 2e-75 55