Gene Information

Name : smpB (W7S_19245)
Accession : YP_006307529.1
Strain : Mycobacterium sp. MOTT36Y
Genome accession: NC_017904
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4231431 - 4231880 bp
Length : 450 bp
Strand : -
Note : COG0691 tmRNA-binding protein

DNA sequence :
GTGGCCACCAATCGCAAAGCGCGGCATAACTATTCGATCATCGAATCGTTCGAGGCCGGGGTCGCGCTGCAAGGCACCGA
GGTCAAAAGCCTGCGCGAAGGCCAAGCTTCGTTAGCTGACGCCTTCGCAACGATCGACGACGGCGAAGTGTGGTTGCGCA
ACTTGTACATTGCGGAGTACCAGCACGGTAGCTGGACCAATCATGACCCCCGGCGCAACCGAAAGTTGTTGTTACATCGG
CAACAAATCGACAGGCTGGTCGGCAAGATTCGAGATGGTAACCTCGCCTTGATGCCGCTGTCTCTGTATTTCTCCGAGGG
CAAGGTCAAGGTCGAACTGGCTCTTGCGCGCGGCAAAAGGGCTTACGACAAACGCCAGGACATGGCCCAGCGCGACGCAC
AGCGCGAAGTGGTCCGTGAACTGGGGCGCCGAGCAAAGGGCATGACCTGA

Protein sequence :
MATNRKARHNYSIIESFEAGVALQGTEVKSLREGQASLADAFATIDDGEVWLRNLYIAEYQHGSWTNHDPRRNRKLLLHR
QQIDRLVGKIRDGNLALMPLSLYFSEGKVKVELALARGKRAYDKRQDMAQRDAQREVVRELGRRAKGMT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 7e-47 68
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 2e-33 48
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 1e-22 44