Gene Information

Name : smpB (W7Y_0549)
Accession : YP_006300500.1
Strain : Bifidobacterium animalis B420
Genome accession: NC_017866
Putative virulence/resistance : Unknown
Product : tmRNA-binding protein SmpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 648607 - 649098 bp
Length : 492 bp
Strand : +
Note : -

DNA sequence :
GTGGCGAAGAAAGAGCAGAGCAACGAGAAGATGATCGCGCAGAACAGGCGCGCGCGGCACGACTACGAGATCGAAGACAC
CTATGAGGCGGGCCTTGCGTTGACGGGCACCGAGGTGAAGTCGCTGCGCGAGGGGCGTGCCTCGCTGGCGGAGTCGTTCA
TCTCGATTGACAAGCGGGGTGAGGTGTGGCTCGAAGGAGCGAACATTCCCGAATACCTCAACGGCACATGGAACAACCAT
GCGCCCAAGCGCAAACGCAAGCTGCTGCTGCACGGCGCGCAGATAGACAAGCTGCGCCGGCAGATTCAAGCGAAGGGCTA
CACCATTGTGCCGCTGCAGCTGTATTTCAACGAAGACGGCCGCGCGAAGCTCAAGATTGCGCTCGCCCGTGGCAAGAAGG
AGTACGACAAGCGGCAGGCGTTGCGTGAAGAGCAAGACAAGCGCGAGGCGTTGCGCATGATGCGCTACAAGAACATGCAT
GCCCGCGGCTGA

Protein sequence :
MAKKEQSNEKMIAQNRRARHDYEIEDTYEAGLALTGTEVKSLREGRASLAESFISIDKRGEVWLEGANIPEYLNGTWNNH
APKRKRKLLLHGAQIDKLRRQIQAKGYTIVPLQLYFNEDGRAKLKIALARGKKEYDKRQALREEQDKREALRMMRYKNMH
ARG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 1e-32 55
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 1e-29 52
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 6e-18 41