Gene Information

Name : PIN17_A1258 (PIN17_A1258)
Accession : YP_006299149.1
Strain :
Genome accession: NC_017861
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1296964 - 1298214 bp
Length : 1251 bp
Strand : -
Note : -

DNA sequence :
ATGGAAAAGAAATATAAAATAGCAGTTGCTGGAACTGGATATGTAGGTCTGAGCATTGCAACACTGCTGAGCCAGCATCA
CAACGTGGTGGCAGTAGACATTATAAAAGAAAAGGTAGACCTTATTAATAATAAACAATCGCCTATTCAGGACGACTACA
TTGAGCAATATTTAGCAGAAAAAGACTTGCACCTCACGGCTACCTTAGACGGGGAAACAGCTTATCGCGATGCCGATTTT
GTCGTGATTGCCACGCCAACGAACTACGACCCAGTGCGCAACTACTTCGACACGACACACGTTGAAGAGGTGATTGAACA
AGTAATACGCGTAAACTCTAACGCTATTATGATTATAAAATCGACCATTCCAGTGGGTTACACCGAGAACGTAAGACAGA
AATACAACTGCGAAAACATTATTTTTGCACCCGAATTCCTGCGCGAAAGCAAGGCACTGTACGATAATCTATACCCCAGC
CGCATTATTGTTGCACGCCCAGAGAACAACGAACGATTGGACAAAGCAGCACACGAGTTTGCCGAACTCTTGAAAGAGGG
TGCCATAAAAGAGGATATTCCAACGCTTTTCATGGGATTGACCGAAGCCGAAGCAGTGAAATTGTTTGCCAATACCTACT
TGGCTTTGCGTGTAAGCTACTTCAACGAACTCGACACATACGCAGAAGTGAAAGGCTTAAACACAGCCAATATAATACAA
GGTGTGTGCCTCGACCCCCGCATAGGCTCGTTCTACAACAATCCATCGTTTGGTTATGGTGGCTATTGCTTGCCAAAAGA
CACGAAGCAACTGTTGGCAAACTATTCAAATGTGCCTGAAAACCTGATTCAAGCCATCGTCGAAAGCAACCGTACACGCA
AAGATTTCATTGCCGACCAAGTGTTGAACAAGGCTGGATATTACGATTATAACGAACAGGGGAACTACAATCCGACGGTA
GAAAAGGAATGTGTGATAGGTGTCTACCGATTGACGATGAAGTCGAACAGCGATAATTTCCGTCAAAGTTCTATCCAAGG
AGTTATGAAGCGCATAAAGGCAAAAGGCGCAAAGGTGCTTATTTACGAACCAACACTCGAAGATGGAACAACCTTCTTTG
GCAGTTTGGTGGTAAACGATTTGCAGAAATTCAAGACGGAATGCGACGAAATCATTGCCAACCGATACGATAGCGCATTG
GACGACGTAAGAGAAAAGGTATACACAAGGGACATTTTCCAATGCGATTAA

Protein sequence :
MEKKYKIAVAGTGYVGLSIATLLSQHHNVVAVDIIKEKVDLINNKQSPIQDDYIEQYLAEKDLHLTATLDGETAYRDADF
VVIATPTNYDPVRNYFDTTHVEEVIEQVIRVNSNAIMIIKSTIPVGYTENVRQKYNCENIIFAPEFLRESKALYDNLYPS
RIIVARPENNERLDKAAHEFAELLKEGAIKEDIPTLFMGLTEAEAVKLFANTYLALRVSYFNELDTYAEVKGLNTANIIQ
GVCLDPRIGSFYNNPSFGYGGYCLPKDTKQLLANYSNVPENLIQAIVESNRTRKDFIADQVLNKAGYYDYNEQGNYNPTV
EKECVIGVYRLTMKSNSDNFRQSSIQGVMKRIKAKGAKVLIYEPTLEDGTTFFGSLVVNDLQKFKTECDEIIANRYDSAL
DDVREKVYTRDIFQCD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 6e-82 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PIN17_A1258 YP_006299149.1 nucleotide sugar dehydrogenase VFG0963 Protein 4e-108 59