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Name : PIN17_0342 (PIN17_0342) Accession : YP_006297871.1 Strain : Genome accession: NC_017860 Putative virulence/resistance : Unknown Product : putative rRNA large subunit m3Psi methyltransferase RlmH Function : - COG functional category : - COG ID : - EC number : - Position : 353939 - 354409 bp Length : 471 bp Strand : + Note : - DNA sequence : ATGAAAGCAACTTTAATCTTGGTGGGAAAAACTACCGAAGATGTCTTCGTGCGTGCCATTGCCGATTATACGGGGCGCAT AGCCCACTACCTGCCGTTCAATATCGTTACGCTACCCGAACTGAAGAACACCAAGAAACTATCGGAAGCGCAACAGAAAG ACCGTGAGGGCGAAATGATATTGAAGGAAATACAAATGTCAGATACGGTTGTACTGCTCGATGAGCACGGCAAAGAGTTC CGTTCGGTGGAGTATGCCGCATGGCTGCAGAAGAAACAGAACACCGCCAAGCGATTGGTGTTTGTCATCGGCGGTCCTTA CGGCTTCTCAAAAGCAGTGTACGACCGTGCCAACGAAAAGATTTCGCTCTCTAAAATGACTTTCTCCCACCAAATGGTGC GCCTTATTTTCGTGGAACAACTCTATCGTGCGTGCAGCATTATCAAGGGCGAACCGTATCACCACGAGTAG Protein sequence : MKATLILVGKTTEDVFVRAIADYTGRIAHYLPFNIVTLPELKNTKKLSEAQQKDREGEMILKEIQMSDTVVLLDEHGKEF RSVEYAAWLQKKQNTAKRLVFVIGGPYGFSKAVYDRANEKISLSKMTFSHQMVRLIFVEQLYRACSIIKGEPYHHE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | BAG06184.1 | conserved hypothetical protein orfX | Not tested | Type-VII SCCmec | Protein | 1e-22 | 41 |
| unnamed | BAB47681.1 | open reading frame X | Not tested | Type-III SCCmec | Protein | 1e-22 | 41 |
| unnamed | BAC53844.1 | open reading frame X | Not tested | SRImec-III and SCCmec-III region | Protein | 1e-22 | 41 |
| unnamed | BAC57492.1 | hypothetical protein | Not tested | Type-IIIinv SCCmec | Protein | 1e-22 | 41 |
| unnamed | BAB72121.1 | hypothetical protein | Not tested | Type-IVa SCCmec | Protein | 1e-22 | 41 |
| unnamed | BAB72138.1 | open reading frame X | Not tested | Type-IVb SCCmec | Protein | 1e-22 | 41 |
| unnamed | BAC67575.1 | open reading frame X | Not tested | Type-IVc SCCmec | Protein | 1e-22 | 41 |
| SAR0024 | YP_039501.1 | rRNA large subunit methyltransferase | Not tested | Type-II SCCmec | Protein | 2e-22 | 41 |
| unnamed | BAA82243.1 | orfX | Not tested | Type-II SCCmec | Protein | 1e-22 | 41 |
| SAV0024 | NP_370548.1 | rRNA large subunit methyltransferase | Not tested | Type-II SCCmec | Protein | 2e-22 | 41 |
| unnamed | BAD24821.1 | conserved hypothetical protein orfX | Not tested | Type-V SCCmec | Protein | 1e-22 | 41 |
| orfX | BAA86653.1 | open reading frame X | Not tested | Type-I SCCmec | Protein | 1e-22 | 41 |
