Gene Information

Name : Q7A_992 (Q7A_992)
Accession : YP_006295479.1
Strain : Methylophaga sp. JAM1
Genome accession: NC_017857
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 996764 - 998176 bp
Length : 1413 bp
Strand : +
Note : PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: phage replicative helicase, DnaB family, HK022 subfamily; replicative DNA helicase

DNA sequence :
GTGGAACAGATAACTTATCCAGAAAGCTATCAAGACAGCGCAACTCAGGCCCTGAAGGTCCCGCCGCATTCAGTTGAAGC
TGAACAGTCCGTTTTAGGCGGCTTGATGCTTGATAACAGTGCTTGGGAACAGGTTTCTGATCTCCTGGTTGAGCAGGACT
TCTATCGTCACGACCATCAACTTATTTTCCGTGGCATAGCCGAATTAATGGAACAAGCCAATCCTGTAGACGTGATCACG
TTAGCGGAATGGCACAATCAGCGCGGTGAACTGGATAAAGTCGGTGAATTGGCTTATCTCGGTGCCTTGGCGCGTAATAC
TCCCAGTGCAGCCAACATCAAAGCCTACGCCTCGATCGTGCGTGAGCGTTCGATTCTGCGTCAGCTTATCCAGATTGGTA
ATAATATTGCCAATATGGCATTTACGCCTGAAGGCCGTAATAGCGAAGAAATGCTCGACACGGCTGAGCGACGCGTTTTT
GAAATTGCAGAAAAAGGTGCAAAACGTGGCGGCGGTTTTATTCAGGTCAAAGATGTTCTGAGTAAGGTAGTCGATAAAAT
TGATACGCTGTTTGAACAGGATAGCGGTATCACCGGTTTGCCAACCGGCTTTATTGATTTTGATGATCAGACATCTGGTT
TGCAACCCGCTGATTTGGTCATTATCGCTGGCCGACCGTCGATGGGTAAAACCACCTTTGCAATGAATATTGCTGAAAAT
GCCGCGATTCACAGCAAACAACCCGTTGCCGTATTCAGTATGGAGATGCCTGCCGACTCGCTGGCGATGCGTATGTTGTC
GTCATTAGGCAGAATTGATCAGCATCGTCTGCGTACTGGTCGATTAAATGATGATGACTGGCCCCGGTTAACTTCAGCCA
TAGCGTTATTGAATGAAGCACCGCTATTTATTGATGATACCGGTGGTTTGACTCCCTCTGAACTGAGAGCCCGGGCGAGA
CGTTTAAAACGTGAGCATGGCCTGAGTTTGATCATTGTCGATTACCTGCAGCTAATGAGTGGCAGTGCCAACGGTCGTCA
GGCAGAAAATCGTACCAATGAAATTTCAGAAATTTCCCGTTCATTAAAGGCACTGGCCAAAGAGCTCAATGTTCCGGTAA
TTGCGTTATCCCAGTTAAACCGTTCACTGGAGCAGCGACCGAATAAACGTCCGGTTATGTCAGATCTGCGTGAATCAGGT
GCAATTGAGCAGGACGCCGATATCATTGTGTTTATCTATCGTGATGAAGTTTATAACGAAGATTCTGCAGAAAAAGGCAA
AGCCGAAATCATCATCAGCAAACAACGTAATGGTCCTATCGGTACCGTGGCGTTAACCTTTCAGGGCAAATACACCCGAT
TTGAAAACTTTGCTCCTGCGTACTACCAAGATTACGGTGATAATGAATCGTGA

Protein sequence :
MEQITYPESYQDSATQALKVPPHSVEAEQSVLGGLMLDNSAWEQVSDLLVEQDFYRHDHQLIFRGIAELMEQANPVDVIT
LAEWHNQRGELDKVGELAYLGALARNTPSAANIKAYASIVRERSILRQLIQIGNNIANMAFTPEGRNSEEMLDTAERRVF
EIAEKGAKRGGGFIQVKDVLSKVVDKIDTLFEQDSGITGLPTGFIDFDDQTSGLQPADLVIIAGRPSMGKTTFAMNIAEN
AAIHSKQPVAVFSMEMPADSLAMRMLSSLGRIDQHRLRTGRLNDDDWPRLTSAIALLNEAPLFIDDTGGLTPSELRARAR
RLKREHGLSLIIVDYLQLMSGSANGRQAENRTNEISEISRSLKALAKELNVPVIALSQLNRSLEQRPNKRPVMSDLRESG
AIEQDADIIVFIYRDEVYNEDSAEKGKAEIIISKQRNGPIGTVALTFQGKYTRFENFAPAYYQDYGDNES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-103 54
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 1e-92 51
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 3e-96 50
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 3e-97 49
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 9e-98 49
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 6e-92 48
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 5e-88 47
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 5e-88 47
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 1e-72 43