|
Name : Q7A_910 (Q7A_910) Accession : YP_006295397.1 Strain : Methylophaga sp. JAM1 Genome accession: NC_017857 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 925765 - 927264 bp Length : 1500 bp Strand : + Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial DNA sequence : ATGAGCAACGAAATAGAAATAGAACTCGACGAAAACCGACTGATAGCCCAGCGCCGTGAAAAACTCACCGAGATCCGGGC GCAGGGCAATGCTTTTCCGAACGATTTTCGCCGCAATGTGATGAACGGCGAACTTCAGGCTGAATACGCTGAATGGGATG CTGAAAAGCTCAAAGAAAATCCACGCCGTGTCAAAATTGCGGGCCGAATGATGACACAGCGTGTCATGGGCAAAGCCAGC TTTGCAACGCTACGCGATATGTCGGGCGATATACAGATCTATGTAGCACGCGATAATTTACCAGAAGGCTTTTATGCCAA CTTTAAAACCTGGGATTTGGGCGACATCGTGGGTGCCGAAGGTATTTTATTTCGTACCCAAAAAGATGAATTATCCGTAC GTGTTGAGAGCGTGCAATTACTGACCAAATCACTGCGTCCATTACCAGAAAAATTCCACGGTCTGTCAGATATGGAAACC CGCTACCGCCAGCGTTATGTCGATCTGATCATGAACGAAGCCAGCCGCGAAACTTTCCGGATTCGTACCAAAGTGATTGA TGGCATACGTCGTTACCTGATGGACAAAGACTACCTCGAAGTCGAAACCCCAATGATGCAAGCCATTCCCGGCGGCGCCA CAGCCAGACCGTTCACCACGTATCACAATGCATTGGATATGGACCTGTTCCTGCGTATCGCACCGGAACTGTATCTGAAA CGACTGATTGTCGGTGGCTTTGAACGGGTATTTGAAATCAACCGTAATTTCCGTAACGAAGGTCTGTCCACTCGTCATAA TCCTGAATTCACCATGGTCGAGTTTTATCAGGCCTATGCCGATTTTAATGATCTAATGGATCTCACCGAAGATATGCTGC GTACCGTGACCCAGAATGTACTCGGCAGCAGCCAGGTACATTATCAAGGTCTGGATATTGATTTTGCCCAGCCGTTTGAT CGCATGACCGTTAAAGATTCCATCCTGCATTTCAACCCGGATCTGAAAGCCGAACAACTCGACAGCATCGAAGCCGCCAG AGAAGTCGCCCTGGGCCTGGGAATTCCATTAAAAGACAGCTACGGTCTTGGCAAAGTCCAAATCGAAATCTTCGAAAAAA CCGTCGAACATCAACTGATGCAACCGACCTTTATTACTGCCTACCCAACCGAAGTCTCCCCATTGGCAAGACGCAGTGAT AACGACCCATTTGTCACCGACCGATTTGAATTCTTCGTCGGTGGCCGAGAAATCGCCAATGGCTTTTCGGAGTTAAACGA CGCCGAAGACCAGGCCGAACGCTTCAAAGCCCAGGTCGCCGAAAAAGATGCCGGTGATATCGAAGCCATGCATTACGACG CTGACTATATCCGTGCACTTGAATACGGTATGCCCCCAACCGCCGGTGAAGGGATTGGTATTGATCGTCTGGTAATGTTG TTGACTGACTCACCTTCAATCAGAGATGTTTTGTTGTTTCCGCATATGCGGCCGGAATAA Protein sequence : MSNEIEIELDENRLIAQRREKLTEIRAQGNAFPNDFRRNVMNGELQAEYAEWDAEKLKENPRRVKIAGRMMTQRVMGKAS FATLRDMSGDIQIYVARDNLPEGFYANFKTWDLGDIVGAEGILFRTQKDELSVRVESVQLLTKSLRPLPEKFHGLSDMET RYRQRYVDLIMNEASRETFRIRTKVIDGIRRYLMDKDYLEVETPMMQAIPGGATARPFTTYHNALDMDLFLRIAPELYLK RLIVGGFERVFEINRNFRNEGLSTRHNPEFTMVEFYQAYADFNDLMDLTEDMLRTVTQNVLGSSQVHYQGLDIDFAQPFD RMTVKDSILHFNPDLKAEQLDSIEAAREVALGLGIPLKDSYGLGKVQIEIFEKTVEHQLMQPTFITAYPTEVSPLARRSD NDPFVTDRFEFFVGGREIANGFSELNDAEDQAERFKAQVAEKDAGDIEAMHYDADYIRALEYGMPPTAGEGIGIDRLVML LTDSPSIRDVLLFPHMRPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-143 | 59 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 5e-82 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Q7A_910 | YP_006295397.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-143 | 59 |
