Gene Information

Name : Q7A_788 (Q7A_788)
Accession : YP_006295278.1
Strain : Methylophaga sp. JAM1
Genome accession: NC_017857
Putative virulence/resistance : Virulence
Product : arabinose 5-phosphate isomerase
Function : -
COG functional category : -
COG ID : -
EC number : 5.3.1.13
Position : 798934 - 799911 bp
Length : 978 bp
Strand : -
Note : PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein

DNA sequence :
ATGAAAATAGATTCGGATAAATTAAAAAAGCTTGCTCTGGCAGTCATCGATACCGAGCTGGAGTCTGTGACTTTGCTTCG
CGATAGAGTTGATGATGATTTTGTTCGTGCCTGTGATTATCTGCTGCAGTGTCAGGGTCGTATTGTGGTGATTGGCATGG
GAAAATCCGGTCATATCGGCAGTAAAATCGCGGCGACGCTGGCCAGCACCGGCAGCCCGGCATTTTTTGTTCATCCCGGT
GAAGCCAGTCATGGTGATTTGGGCATGATCACCGACAAAGATGTTGTTCTGGCTTTATCCAACTCGGGTGAAACTGCGGA
GATTCTGACCATATTGCCATTGATTAAACGACTTGGTGTGCCATTAATCACAATGAGTGGTCGGATGGATTCAACACTTT
CGTTATGCGCTGACGCGACTATCAACGTCAGTGTTAAAAAAGAAGCCTGCCCATTGGGATTAGCCCCGACATCCAGTACC
ACCGTCGCACTGATAATGGGTGATGCACTGGCCATTGCGTTATTAGAAACCCGAGGCTTTACTGCTGAAGATTTTGCCTT
ATCTCATCCGGGCGGCAATCTTGGTCGTCGATTATTATTACGTGTTAGCGACATCATGCATACCGGCGCAGCGATCCCTA
AAGTGAATGAACAGGCATTACTGCGTGAGGCACTGATTGAAATGTCTGACAAAAGCCTGGGCATGACAGCCGTGGTGGAT
AATGATGACAAGCTGGTGGGGATCTTCACCGATGGTGATTTGCGTCGAGTCCTGGCACAGGAAGTGAATATTCTGACAGC
CACTCTTAAAGATCATATGACTCAACATTGTAAAACAGGCCAGGCAGAGATGCTGGCCGCAGAAGCATTGCAAATGATGC
AACAATACAAAATCAATGGTTTGTTAATTACCGATAACAACCATAAATTAATTGGTGCTTTGAATATGCACGATTTATTG
CGTGCTGGCGTAGTCTGA

Protein sequence :
MKIDSDKLKKLALAVIDTELESVTLLRDRVDDDFVRACDYLLQCQGRIVVIGMGKSGHIGSKIAATLASTGSPAFFVHPG
EASHGDLGMITDKDVVLALSNSGETAEILTILPLIKRLGVPLITMSGRMDSTLSLCADATINVSVKKEACPLGLAPTSST
TVALIMGDALAIALLETRGFTAEDFALSHPGGNLGRRLLLRVSDIMHTGAAIPKVNEQALLREALIEMSDKSLGMTAVVD
NDDKLVGIFTDGDLRRVLAQEVNILTATLKDHMTQHCKTGQAEMLAAEALQMMQQYKINGLLITDNNHKLIGALNMHDLL
RAGVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 3e-42 45
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 2e-42 45
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 4e-42 45