Gene Information

Name : Q7A_718 (Q7A_718)
Accession : YP_006295209.1
Strain : Methylophaga sp. JAM1
Genome accession: NC_017857
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 718113 - 719645 bp
Length : 1533 bp
Strand : +
Note : PFAM: Transposase IS66 family

DNA sequence :
ATGAATTTTCAGTCAAAACCGCTGCCCGATGACCCCACTGCATTGAAACAAATGCTGGTTGATTTGCAGGTGCAGCTTGA
GACTGAAAAACGCCTGAACCAGACCCTGAGGTTGCGTTTACAAGCACTGCTTCGTCAGCGTTTTGGTCGCTCCTCTGAAA
AGCAGCAAGACACGACCCAGCTGGATTTATTGATTGAGGACACGGAAACCGCCATTGCGGCGATAGAACTGCCGGCAACA
GAGAAACCGGCTACTCAGGAAGTGCCACGGGCCCGTAAGCCGTTGCCCGCCCATTTGCCCCGCACGGTTCAACAACAGGC
ACCTGCCAGTTGTGATTGCCCTGATTGTGGCAAGGCGATGAAGGCGGCCGGTGAAGAGGTGTCCGAGCTGCTGGATGTGA
TGCCCGCCCAATACCGGGTGATTAAAATCGTTCGTCCCAAATACAGTTGCAAGTCTTGCGAGCGTATTGTGCAAGCCCCA
GCCCGGGAACGGGTCATTGATAAAGGCATGGCCAGTTCTGCCTTAATCGCCCAGGTCATTGTCGATAAATACGCGGACCA
CCTGCCATTGTATCGCCAGGCTGAGCGGTTCAAGCGCGAAGGCATTGATCTTGACCGTTCAACGCTCGCAGGTTGGGTGG
GCCGGGCCGGTGCTTTACTTAAGCCATTGGTAGGCGCTATCCGAGAGCATGTGATGGCAGGTCATAAACTGCACGCAGAT
GACACCACGGCGCCGACCTTGAAACCGGGCAATGGCAAAACCCTGACTGGCCGTTATTGGAATTATGTGCGTGATGACCG
GCCATTTTCAGGTAAAGCGCCACCGGCGGTGTGGTTCCAGTACAGCACGTCACGCAAAGGTCAGGAACCGTTACAACACC
TCAAAGGCTTTAAGGGTGTGATACAGGCTGATGCCTATGCAGGCTATAACCTTGCGGTGCAACGCGGTATCACCCGCGCC
GGCTGCTGGGCACATGTGCGGCGCAAGTTTTATGAAATAGCCGAAGCCACCGACAGTCCCGTGGCCAGGGAAGCCATTAA
GCGGATAGAAGCCTTGTATCGTATTGAACGCAGCATGAACGGCAGGCCACCGGATGAGCGACGACATATCCGGCAACAAC
AGGCTGCGCCCTTAATGGCTGACTTTAAAGCGTGGCTTGATTCAAGACTGCGGGAATGTGCCAAAGGCTCAGGGCTTGGC
AAGGCGATTAACTATGCCCGTAAGCAATGGGAGAGCCTGGTGCTGTACCTTGAAGACGGTCATGTTGAAATTGACAACAA
TGCCGCTGAGCGGGCTATCCGGCCGCTGGCGCTCGGTCGTAAAAACCATCTGTTTGCTGGCTCTGAAGAGGGTGGGCATT
ATGGGGCTGCGTTATACAGTATCCTCGGGACGGCCAAGCTTAACGGCATTGATCCCAAAGCCTACCTCACCGCTGTGCTC
AAACGCATCAACAACACGCCCATCAACCAGGTCGAGCAATTGCTGCCCTGGAATATTGACCTTAGCCAACCAGCTGTGAG
CGAAGCTGTCTAG

Protein sequence :
MNFQSKPLPDDPTALKQMLVDLQVQLETEKRLNQTLRLRLQALLRQRFGRSSEKQQDTTQLDLLIEDTETAIAAIELPAT
EKPATQEVPRARKPLPAHLPRTVQQQAPASCDCPDCGKAMKAAGEEVSELLDVMPAQYRVIKIVRPKYSCKSCERIVQAP
ARERVIDKGMASSALIAQVIVDKYADHLPLYRQAERFKREGIDLDRSTLAGWVGRAGALLKPLVGAIREHVMAGHKLHAD
DTTAPTLKPGNGKTLTGRYWNYVRDDRPFSGKAPPAVWFQYSTSRKGQEPLQHLKGFKGVIQADAYAGYNLAVQRGITRA
GCWAHVRRKFYEIAEATDSPVAREAIKRIEALYRIERSMNGRPPDERRHIRQQQAAPLMADFKAWLDSRLRECAKGSGLG
KAINYARKQWESLVLYLEDGHVEIDNNAAERAIRPLALGRKNHLFAGSEEGGHYGAALYSILGTAKLNGIDPKAYLTAVL
KRINNTPINQVEQLLPWNIDLSQPAVSEAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-88 50
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 8e-100 47
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 5e-101 47
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 1e-99 47
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 1e-99 47
tnp AEA34686.1 transposase Not tested Not named Protein 7e-100 47
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-100 47
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-100 47
unnamed AAC31494.1 L0015 Not tested LEE Protein 1e-100 47
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 7e-101 47
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 9e-101 47
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 8e-101 47
unnamed AAL57570.1 unknown Not tested LEE Protein 8e-101 47
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-103 46
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 1e-94 45
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 1e-90 45
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 2e-96 45
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 2e-96 45
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 6e-79 45
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 5e-79 45
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 1e-76 44
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 5e-80 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7A_718 YP_006295209.1 transposase VFG1700 Protein 2e-88 50
Q7A_718 YP_006295209.1 transposase VFG0793 Protein 6e-101 47
Q7A_718 YP_006295209.1 transposase VFG1513 Protein 8e-77 44
Q7A_718 YP_006295209.1 transposase VFG1736 Protein 6e-75 43