Gene Information

Name : Q7A_380 (Q7A_380)
Accession : YP_006294878.1
Strain : Methylophaga sp. JAM1
Genome accession: NC_017857
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : 1.11.1.15
Position : 380118 - 380612 bp
Length : 495 bp
Strand : +
Note : PFAM: Redoxin

DNA sequence : 
ATGGCAACAGTCACTTTGAAAGGAAATCCATTCGAGACCGTGGGGAATCTGCCTAAAGTTGGCGATAAAGCGCCTGATTT
TTCAGTAGTAAAAGACGATCTGTCTGATCTGAATTTAACGGATATCAGTGGTCGCATCGTACTGAATATTTTTCCATCCA
TTGATACTGACACCTGTGCAATGTCAGTTCGTCAATTTAATCAAAAAGCTACGACGCTTGATAACACCACGGTAGTCTGT
ATCTCAAAAGACCTGCCTTTCGCTTTGGCCCGCTTCTGTGGTGCTGAAGGTCTGCATAAAGTTGAAGTTGGTTCAGCATT
CCGTTCAAGTTTTGGTGAAGACTATGGCGTTACGGTTAAAACCGGTCCGTTAAAAGGGCTATTATCCCGTGCAGTCGTCG
TCATTGATGAAAACGGCAAAGTTATTTACACCGAGCAAGTTGCCGAAACCGCTGATGAACCTGATTATGATGCTGCGTTA
AACGCATTGAATTGA

Protein sequence : 
MATVTLKGNPFETVGNLPKVGDKAPDFSVVKDDLSDLNLTDISGRIVLNIFPSIDTDTCAMSVRQFNQKATTLDNTTVVC
ISKDLPFALARFCGAEGLHKVEVGSAFRSSFGEDYGVTVKTGPLKGLLSRAVVVIDENGKVIYTEQVAETADEPDYDAAL
NALN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-30 45
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-30 45
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 8e-31 45
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 7e-31 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7A_380 YP_006294878.1 thiol peroxidase VFG0087 Protein 3e-31 45