Gene Information

Name : Q7A_3108 (Q7A_3108)
Accession : YP_006297523.1
Strain : Methylophaga sp. JAM1
Genome accession: NC_017857
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3126549 - 3126938 bp
Length : 390 bp
Strand : -
Note : PFAM: Transposase

DNA sequence :
ATGGAACGTATTGAAATTTTTACTGGCGAACAGCGTCGTCGTCGCTATACTCCGCAGGAGAAAGCCAAATTTGTTGCCAT
GAGTATGCAGCCAGGGTATTCGGTGTCACTGGTGGCCAGACAAAACGGCATCACCCCAAGTTTATTGTTTAAGTGGAAGA
AACTCATGCAAGACGGTGGCATGTCGGCAATTCAATCTGGTGATGAGGTGGTCAGCTCAGCTGAGCACAAAGCGTTGCAG
AAAAAAGTGAAGCAACTTGAGCAACTGCTTGGCCGCAAAACCATGGAAACGGAAATTTTGAAAGAGGCGCTGGAGATAGC
CCAGTCAAAAAAGTTAATATCGCGCATGCCATTGTTGCCACCGGACGATTCCCTCTCATCAGAGTCGTAA

Protein sequence :
MERIEIFTGEQRRRRYTPQEKAKFVAMSMQPGYSVSLVARQNGITPSLLFKWKKLMQDGGMSAIQSGDEVVSSAEHKALQ
KKVKQLEQLLGRKTMETEILKEALEIAQSKKLISRMPLLPPDDSLSSES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 2e-17 49
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 3e-17 49
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 3e-17 49
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 3e-17 49
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 2e-17 49
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 2e-17 49
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 1e-16 48
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 3e-17 48
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 3e-17 47
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 1e-16 47
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 1e-16 47
unnamed AAL67376.1 insertion sequence protein Not tested PAI II CFT073 Protein 5e-13 44
insC YP_002414034.1 IS2 insertion element repressor InsA; KpLE2 phage-like element Not tested Not named Protein 9e-13 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7A_3108 YP_006297523.1 transposase IS3/IS911 VFG0648 Protein 9e-18 47
Q7A_3108 YP_006297523.1 transposase IS3/IS911 VFG0622 Protein 3e-17 47
Q7A_3108 YP_006297523.1 transposase IS3/IS911 VFG0609 Protein 3e-17 47
Q7A_3108 YP_006297523.1 transposase IS3/IS911 VFG1733 Protein 2e-13 44