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Name : Q7A_3107 (Q7A_3107) Accession : YP_006297522.1 Strain : Methylophaga sp. JAM1 Genome accession: NC_017857 Putative virulence/resistance : Unknown Product : integrase, catalytic region Function : - COG functional category : - COG ID : - EC number : - Position : 3125851 - 3126543 bp Length : 693 bp Strand : - Note : PFAM: Integrase core domain DNA sequence : TTGGGTGTGTCGCGCTCTAACCTTTACCAACGGATTAATGGTCGACAAGCAGGTCGTCCGGCACGTTACAGCAAATCAGA GGATGCCATGCTGTTGCCACTGATTGAGGCGTTATGTGACAAACGTGCAACCAATGGCTATCGACGTATCACGGCGCATT TAAATCGCCAGTTGAAAATAGACGAACATCCTTTAAGCAGGGTGAATCCCAAACGGATTTACCGCATCATGCGACTGAAT AAATTGCTGTTAGCGAAGCATACTGGTCGTGTTGGTGATAATCGAGCGCATGAAGGCAAGGTTATTACCCTTCACTCCAA CACACGTTGGTGCTCAGATGGTTTTGAGATCGGCTGTTGGAATAAAGAAAAAGTCCGAGTAGTGTTTAGTCTCGACGGCT GCGACCCTGAAGTCATGAGTTATGTTGCCACCACCACTGGCATTAACGCTTTGATGGTGCAGGACGTATTGGTCGAGAGT ATCGAAAAGCGGTTTGGTGATGTTCAAGAGCTACCTCGCCAGGTGGAGTGGCTGACCGATAATGGGAGTTGCTATATTGC CGATGACACTCGGCAGTTCGCGAAATCACTGGGCTTTAAGGTATGCACAACCCCTGTCAGAAGCCCTGAAAGTAACGGCA TGGCTGAGGCGTTTGTGAAGACGTTTAAACGGGATTATGTTTACTTAACCTGA Protein sequence : MGVSRSNLYQRINGRQAGRPARYSKSEDAMLLPLIEALCDKRATNGYRRITAHLNRQLKIDEHPLSRVNPKRIYRIMRLN KLLLAKHTGRVGDNRAHEGKVITLHSNTRWCSDGFEIGCWNKEKVRVVFSLDGCDPEVMSYVATTTGINALMVQDVLVES IEKRFGDVQELPRQVEWLTDNGSCYIADDTRQFAKSLGFKVCTTPVRSPESNGMAEAFVKTFKRDYVYLT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL67379.1 | transposase-like protein | Not tested | PAI II CFT073 | Protein | 5e-43 | 52 |
| unnamed | CAC39284.1 | hypothetical protein | Not tested | LPA | Protein | 1e-42 | 51 |
| tnpF | AAD44739.1 | TnpF | Not tested | SHI-2 | Protein | 4e-42 | 50 |
| SF2985 | NP_708759.1 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 7e-42 | 50 |
| insD | YP_002414033.1 | insertion element IS2 transposase InsD | Not tested | Not named | Protein | 4e-44 | 50 |
| S4061 | NP_839230.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 2e-43 | 49 |
| aec49 | AAW51732.1 | Aec49 | Not tested | AGI-3 | Protein | 3e-40 | 49 |
| ECO111_3773 | YP_003236109.1 | putative IS2 transposase InsAB | Not tested | LEE | Protein | 1e-40 | 48 |
| S3189 | NP_838472.2 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 3e-42 | 48 |
| S4050 | NP_839218.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 3e-43 | 48 |
| SF3708 | NP_709447.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 3e-43 | 48 |
| SF3721 | NP_709460.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 3e-43 | 48 |
| unnamed | CAC39283.1 | hypothetical protein | Not tested | LPA | Protein | 1e-42 | 47 |
| insD | YP_854263.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 2e-36 | 46 |
| insD | AAZ04432.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 2e-36 | 46 |
| c5197 | NP_757045.1 | transposase insD | Not tested | PAI II CFT073 | Protein | 2e-35 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Q7A_3107 | YP_006297522.1 | integrase, catalytic region | VFG0649 | Protein | 3e-42 | 50 |
| Q7A_3107 | YP_006297522.1 | integrase, catalytic region | VFG1732 | Protein | 2e-44 | 50 |
| Q7A_3107 | YP_006297522.1 | integrase, catalytic region | VFG0621 | Protein | 1e-43 | 48 |
| Q7A_3107 | YP_006297522.1 | integrase, catalytic region | VFG0608 | Protein | 1e-43 | 48 |
