Gene Information

Name : Q7A_3045 (Q7A_3045)
Accession : YP_006297465.1
Strain : Methylophaga sp. JAM1
Genome accession: NC_017857
Putative virulence/resistance : Unknown
Product : helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3075477 - 3077867 bp
Length : 2391 bp
Strand : -
Note : PFAM: Eukaryotic and archaeal DNA primase small subunit; Type III restriction enzyme, res subunit

DNA sequence :
ATGAATGGCGCTCGCTACCAAGATGTATCTGCTATTGATAACAGGCTAGCTGAGCTTGAAAACGAAAAGCAACAGCTTCT
CGCATTAAGAAACTCTTTGCTTAACGCTCAAAGCGATCGTCCGATACAGACATTTACCCCAGAACAAAAAATTGCCATCT
TCAGACAACGATTCCGCGGACGAGAGGATATCTTTGCCAACCGTTGGCAGAACCAACAGGGACGCAGTGGCTATTCCGTT
GCCTGTGACAACGAGTGGATCGCTGGAGTATGCAACAAGCCCCGAATAAAGTTTCAGGAGTGTACGCATCGGCAATTCAG
TGAATTAAGCGAACAGATTATTTATCGCCATCTTGCCGGTCATCAAGTCGTAGGGCTTTATCCGTTATTGAAAGACAATA
CTTGTTATTTGTTGGCTGCCGATTTTGACAAAGGTTGTTGGCAAGAAGAAGTCAAAGCGATGTCCAGAGCATGCCAAGAA
TTCGGCATTCCTCATGCCATAGAAATCTCGCGCTCAGGTAACGGAGCGCACTTATGGATATTCTTTGAAACGAATATCCC
TGCCAACCAAGCACGGGTACTCGGGGTTGTGCTACTTGATAAAGCGATGGAGATATTTCCAAATCTTTCGTTTGACTCTT
ATGACAGGTTATTTCCGAACCAAGACTTTCTTTCTGAGGGCGGATTTGGCAACCTCATAGCTTTACCACTTCAAAAAGAG
GCTCGGCTTTCAGGCCGTAGTTGTTTTGTTGATAGCGAGTTAAATGCCATTGACGATCAATGGCTGTATCTCTCACAGCT
TAAAACGCTTACTCAACCAAGTGTTGAAGAGCTCATCGCGGCAATTTCACCAAATACTCATTTATTGTCAGAACAGGGGC
TCGCAGACAACCGTCCTCCATGGGAAATCACTGCAAAAAGCCCCCCAATTAAGTTAGAGCGCCTGCCGAAAAGCATTACC
ATCACCCTGGCGAACCACATCTATTTTTTGATGAGTGAGTTACCTGGGCCGCTGCTGGCAGGACTAAAGCGATTGGCCAG
CTTTTCGAATCCTGTGTTTTTTAAAACGCAAGCGTTACGCTTTTCCACTCATGGCATTCCAAGATTTATTTCTTGTGCAC
GCATTGAAAACGGTTATTTAGCACTATCGCGAGGCTGTCTCGATGAAGCGATTGCTTTGTTACAAGAGCACAATATCTCT
GTGCAATTTGACGATAAGCGCGAAGCAGGCAAACCATTAATCAAACTTGCTCCTACCTTCACGTTGCGAAAAAACCAGCG
TGAAGCGGTAGCAGCTATGAGTAAGCATGACTTCGGCATATTGCATGCACCAACGGCATTTGGAAAAACAGTTACTGCCA
TCGGCATGATCGCAAAACGAAAAGTAAACACGCTGATCCTTGTTCATAGCCGCCAACTGCTTGAGCAATGGCACGAGCGA
TTACGCACATTCTTGCCAGATGTGAACATTGGCAGTGTAGGTGGTGGTAAAAGAAAACCGAGTGGCGTTATCGATATTGC
TACTTACCAAAGCTTGGTCAATAAAAAGGACAACTCAATTTCACACTTAATACAAGACTACGGTCATATCATCGTCGATG
AATGCCATCACCTATCCGCTCCAAGGTTTGAAATGGTGCTCAACGAAGTAAGAGCAAAATATGTATTGGGTCTAACAGCG
ACACCCGAAAGGCAAGATGGGCATCAAAAAATCATTTTTATGGCAGCCGGGCCAATTCGCTACAAAGTGAAAAGCAGCAC
TGACGAACAGTTTACTCAGACAGTCATCATCAATCAGTTCTACGATGCACCGCCTCACGAGTTAGTTAAAACAGATGAAC
GTCCAAAAGTGACTGATGCCTATCGTTGGCTTGTCGATAATGAATGCCGCACGTCAAAGATTATCTCAGACGCCATCCAG
TGTGTTCACAATGGCGGACACCCGTTAATTCTAACGGAAAGGAGAGATCACGCCGAAAACATCCACACACAACTTGGCGA
CATGGGTATTAACTCAATCGTTTTGAAAGGTGCAATGAAAGCAGCTGAACGTAAATATGCCGACAAGCACCTGCAATCCG
CTCAAATAGTGGTCGCAACAGGTAAGTATGTGGGAGAGGGATTTGATCTTCCAAGGCTGGACACATTGTTTTTAGCTATG
CCAATCGCCTGGAAAGGTACTTTGGCTCAATACGCAGGTCGGATCCACCGAGAAGCGGAAGGGAAGACACAAGTGACAAT
TCACGACTATGTGGACTGCGCACTTCCTATGCTGCAACGCATGTTTAAGAAACGAGAAAAAAGCTACAAGGCGATGGGCT
ACACCCTCCAATATGTTGGTAACGATAATGACAACCTGACCACATTGCAGCTCGAAGCCAACCTCTCCTGA

Protein sequence :
MNGARYQDVSAIDNRLAELENEKQQLLALRNSLLNAQSDRPIQTFTPEQKIAIFRQRFRGREDIFANRWQNQQGRSGYSV
ACDNEWIAGVCNKPRIKFQECTHRQFSELSEQIIYRHLAGHQVVGLYPLLKDNTCYLLAADFDKGCWQEEVKAMSRACQE
FGIPHAIEISRSGNGAHLWIFFETNIPANQARVLGVVLLDKAMEIFPNLSFDSYDRLFPNQDFLSEGGFGNLIALPLQKE
ARLSGRSCFVDSELNAIDDQWLYLSQLKTLTQPSVEELIAAISPNTHLLSEQGLADNRPPWEITAKSPPIKLERLPKSIT
ITLANHIYFLMSELPGPLLAGLKRLASFSNPVFFKTQALRFSTHGIPRFISCARIENGYLALSRGCLDEAIALLQEHNIS
VQFDDKREAGKPLIKLAPTFTLRKNQREAVAAMSKHDFGILHAPTAFGKTVTAIGMIAKRKVNTLILVHSRQLLEQWHER
LRTFLPDVNIGSVGGGKRKPSGVIDIATYQSLVNKKDNSISHLIQDYGHIIVDECHHLSAPRFEMVLNEVRAKYVLGLTA
TPERQDGHQKIIFMAAGPIRYKVKSSTDEQFTQTVIINQFYDAPPHELVKTDERPKVTDAYRWLVDNECRTSKIISDAIQ
CVHNGGHPLILTERRDHAENIHTQLGDMGINSIVLKGAMKAAERKYADKHLQSAQIVVATGKYVGEGFDLPRLDTLFLAM
PIAWKGTLAQYAGRIHREAEGKTQVTIHDYVDCALPMLQRMFKKREKSYKAMGYTLQYVGNDNDNLTTLQLEANLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1129 NP_286664.1 helicase Not tested TAI Protein 7e-155 44
Z1568 NP_287072.1 helicase Not tested TAI Protein 7e-155 44