Gene Information

Name : Q7A_2679 (Q7A_2679)
Accession : YP_006297112.1
Strain : Methylophaga sp. JAM1
Genome accession: NC_017857
Putative virulence/resistance : Unknown
Product : ISDet2, transposase orfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2727199 - 2727882 bp
Length : 684 bp
Strand : +
Note : PFAM: Integrase core domain

DNA sequence :
ATGCCTGCCAGGCTTGAGCTGAAATCATTGGCTGCACGCTATCCAAGATATGGTTATCTGATGTTGCATGGGCTGCTTAA
AGCGCAGGGACTGGTGGTGAATAAAAAGCATACCTACCGACTGTATACCGAAGAAGGACTGCAGGTTCGTACCAAGAAAC
GTAAGAAATTAACCCGACCAAAGCAACCACTCGAAATACCGTCAGCACCAAATCAACGGTGGTCAATGGATTTTGTCTCT
GATCAACTAAGTAATGGTCGGCGGTTTCGCGTGCTTAATGTAGTAGATGATTATTCACGGGAAATGGTGGGTCAGCTTGT
CTCAGTTTCAATCAGTGGCAGACAAGTCGCCAGGTTCCTTGGCCAACTGACTGAGCAACGGGATAAACCTGCCAAAATCG
TCTGTGATAATGGCACTGAATTCACTAGTAAAGCGATGTTTTTCTGGAGTAAAGAAAGTGGCATCAGTTTAGGGTTCATA
CAGCCTGGCAAGCCGACACAGAATGCGTTTGTAGAAAGTCTTAATGGCAAATTCAGGAATGAATGTCTTAACCAACACTG
GTTTAGAACACTGGATGAAGCCAAATATGAAATTGATTTATGGCGGGAGCATTACAACCACGTCCGACCGCATAGCTCAT
TGAATTACATGCCACCAGTTGAATACGCAAAACATGCAGCATAA

Protein sequence :
MPARLELKSLAARYPRYGYLMLHGLLKAQGLVVNKKHTYRLYTEEGLQVRTKKRKKLTRPKQPLEIPSAPNQRWSMDFVS
DQLSNGRRFRVLNVVDDYSREMVGQLVSVSISGRQVARFLGQLTEQRDKPAKIVCDNGTEFTSKAMFFWSKESGISLGFI
QPGKPTQNAFVESLNGKFRNECLNQHWFRTLDEAKYEIDLWREHYNHVRPHSSLNYMPPVEYAKHAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 3e-38 51
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 2e-43 50
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 2e-28 47
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 1e-30 43
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 2e-33 42