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Name : Q7A_2176 (Q7A_2176) Accession : YP_006296635.1 Strain : Methylophaga sp. JAM1 Genome accession: NC_017857 Putative virulence/resistance : Unknown Product : tmRNA-binding protein SmpB Function : - COG functional category : - COG ID : - EC number : - Position : 2238463 - 2238954 bp Length : 492 bp Strand : - Note : PFAM: SmpB protein; TIGRFAM: SsrA-binding protein DNA sequence : ATGTATAATGCCTTGATGGCCACCAAGAAAAAACCACAAAACACTGATAACACTATCGCCCGTAACCGGAAAGCGCGTCA TGAATTTTTTATAGAAGAAAAATTCGAGGCGGGTTTGGTGCTGGAGGGATGGGAAGTCAAAAGCTTACGTGAAGGCAAAG CACAGCTGAGTGATAGCTACGTGCTGATTCGTCATGGCGAAGCCTGGTTAGCCAATGCACTGGTTACCGCATTGAAAACA GCTTCTACCCACGTCGTTCCAGAACCACAACGCGACCGTAAACTGCTGCTCAATCGTAACGAGCTAAATAAGCTGATTGG CGCAGTTGAGCGCAAAGGTTACACCTTGATCCCCCTTGCCATGTATTGGAAGCGGGGCAAAGCCAAGGTCGAAATTGCGC TGGCTAAAGGCAAGCAAATGCACGACAAGCGCGCCACCATGAAAGAACGCGATTGGCAGCGTGATAAAGAAAGACTGTTT AAAAATATCTAA Protein sequence : MYNALMATKKKPQNTDNTIARNRKARHEFFIEEKFEAGLVLEGWEVKSLREGKAQLSDSYVLIRHGEAWLANALVTALKT ASTHVVPEPQRDRKLLLNRNELNKLIGAVERKGYTLIPLAMYWKRGKAKVEIALAKGKQMHDKRATMKERDWQRDKERLF KNI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 1e-33 | 54 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 4e-16 | 46 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 1e-17 | 43 |
