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Name : Q7A_2175 (Q7A_2175) Accession : YP_006296634.1 Strain : Methylophaga sp. JAM1 Genome accession: NC_017857 Putative virulence/resistance : Unknown Product : nuclease-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 2235787 - 2237652 bp Length : 1866 bp Strand : - Note : PFAM: Nuclease-related domain; UvrD/REP helicase DNA sequence : TTGGCAGAGATTATCCCCAGTCTAAGTCGAGAAGTTTTATCCAGAATGACATCTGGTGAAAAGCGGCTTGCTACTCGTCT GAGAAATTTCCTGGAAGATGACTATCTATGCTGGTATGACATCCCTATAGGGAAAAGACGACGTTATCCTGATTTTATAA TTTTGCACCCCAGCCGAGGCTTATTATTTCTCGAAGTAAAAGACTGGAAAGCTTCAAGCATAAAAAAAATAACCAAAGAA ACGGTAGAGTTGTTAACTATTAATGGCTTAAAAACTGTCCCCAATCCTTTTGTGCAAGTCCGCCAGTATGCCTATCAAGG AATTCGTCTATTAGAAGCGGATAAAGAATTAAGGCAGAAAGGCTCAAAGTATGACGGCAATTTAGTCACGCCATATGCCC ACGGCGTTGTGTTTACCAATATCACTCGCAATCAAATAGAAGCAGCTATTCCAGCTGAATACAGAGAAAAGCTACTTCCT GATCATTTAATGATTTACAAAGACGAGATGACAGAGTCTGTTGATCCCGAAGAATTCCAAAAAAGACTCTGGGATATGTT TCCCTATCAGTTTCAAACCAAACTCACCTTGCCTCAAATTGATCGAATACGATGGCATTTATTCCCTGAAGTACGCATTT CTCAACCTAGCCAGGAAAATCTATTTGGCACTCTCATCAATCAACCTGATACACCTGAGGATCTGTCGACGCTGAGTGAA CAGATTCCAGACATCATCCGCATAATGGATATTCAACAAGAGCAACTAGCTCGGAGCCTGGGAGAAGGACACCGGGTTAT CCATGGGGTAGCTGGCTCGGGTAAAACGTTGATACTCGGTTATCGTGCTGAATTACTCGCTAAATTGACCAACAAACCTA TTCTTGTACTGTGTTTCAATATTACGCTTGCAGCAAAATTGCGAAGCTTTATGGTAAGCAAAGGTATCTCCGACAAAGTG AATGTTCATCATTTCCATGATTGGTGCAGCCAGCAATTAAAAACCTATCATGTAGATGTCTTAGCTGGCGATGAGCCCTA TTGGGAACGACAAGTCATTTCGGTTATCAATGGCGTTAGTAAGGATGATATTCCTCGCGCACAATATAGCGCAGTGATGA TTGATGAAGGCCATGATTTTGAGTCAGATTGGCTAAAACTTGTTGTTCAGATGATTGATCCCGAAACCAATTCATTACTC TTACTGTGTGACGATGCCCAGTCCATTTATAAGAAAAAATCAGGCCTGAGCTTTAGTTTGGCTAGTACCGGGATTCAAGC CCAAGGTCGAAGTACAATTTTAAAATTAAATTATAGAAATACCCGGGAAATACTTGCTTTTGCTTATGATTTTGCTAAAG AATATTTCGGAGCAAGCCACGATGATGTTGATATTCCTTTGATCCAGCCAGAAGCTGCTGGCATTCACGGTGAAAGACCC ACTGTGCATTTTCTCAAACAATGGCAAGACGAAATCAGCGATACCATAACTTGTATAAAAAAATGGCACCAGCGAGGAGG AGAGTGGCGAGACATGGCTATTTTATTCGCTGCAAATTATCAAGGCAAAGCCATTGCGGATTCGTTACACCAACATGGAA TTCCCTATTCCTGGTTAGGCTCAAAAGAAACTAAACATGCATATAACCCGACCAAAGATAGTGTCTCTGTCTTGAGTATT CATAGTAGTAAAGGGCTGGAATTTCCTGCTGTAGTAATCGTTGGCATAAGCCAACTGAAACAAGATGATATTAATGCTGA AGCTCGCCTACTTTATGTGGGCATGACCCGTGCCCAGAAACACCTGCATATGACCGTTTCTCAAAAAAATCTTTTAACAG AGCGAATTCTCAAAATAGCGAGTTAA Protein sequence : MAEIIPSLSREVLSRMTSGEKRLATRLRNFLEDDYLCWYDIPIGKRRRYPDFIILHPSRGLLFLEVKDWKASSIKKITKE TVELLTINGLKTVPNPFVQVRQYAYQGIRLLEADKELRQKGSKYDGNLVTPYAHGVVFTNITRNQIEAAIPAEYREKLLP DHLMIYKDEMTESVDPEEFQKRLWDMFPYQFQTKLTLPQIDRIRWHLFPEVRISQPSQENLFGTLINQPDTPEDLSTLSE QIPDIIRIMDIQQEQLARSLGEGHRVIHGVAGSGKTLILGYRAELLAKLTNKPILVLCFNITLAAKLRSFMVSKGISDKV NVHHFHDWCSQQLKTYHVDVLAGDEPYWERQVISVINGVSKDDIPRAQYSAVMIDEGHDFESDWLKLVVQMIDPETNSLL LLCDDAQSIYKKKSGLSFSLASTGIQAQGRSTILKLNYRNTREILAFAYDFAKEYFGASHDDVDIPLIQPEAAGIHGERP TVHFLKQWQDEISDTITCIKKWHQRGGEWRDMAILFAANYQGKAIADSLHQHGIPYSWLGSKETKHAYNPTKDSVSVLSI HSSKGLEFPAVVIVGISQLKQDDINAEARLLYVGMTRAQKHLHMTVSQKNLLTERILKIAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S12 | AAQ19135.1 | putative UvrD/REP helicase | Not tested | PAI I CL3 | Protein | 4e-116 | 44 |
| uvrD | ADD91733.1 | putative uvrD/REP helicase | Not tested | PAI-I AL862 | Protein | 2e-117 | 44 |
