Gene Information

Name : Q7A_1980 (Q7A_1980)
Accession : YP_006296442.1
Strain : Methylophaga sp. JAM1
Genome accession: NC_017857
Putative virulence/resistance : Virulence
Product : two-component system response regulator QseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2031798 - 2032457 bp
Length : 660 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGCAAATACTGCTAATTGAAGACGATCTGTCATTGGCGCAGGGACTTATGCGTTCGCTGCGCCATGACCGTTTTACCGT
CAATCATTTAAGCTTGGGCCGTCAGGCAATTAACAGTATTAAAACCGCTGCTCCGGATATCGTGATCCTTGATCTGGGCT
TACCGGACATGGATGGTACAGCGGTATTGGCAGAGATCCGTAAGGTGAATGCAAGCTTACCAATATTGGTATTAACGGCT
CGAGGCAGCATCAATGATCGGGTTATTGGGCTGGATGCCGGTGCTGATGATTATCTGGCCAAACCATTTGATATCGACGA
ACTGCTGGCCAGGTTAAGAGTTTTTGAACGTCGTCTGAGCAGCCAGCAACATGCCGCATTGCAGATTGGCCCCGTCAGTC
TTGATAACAAAACCATGCAGTTAAAAGTCGATGATGCCCTGGTTGAGTTACCGCGTCGCGAATTTATGTTACTGAAAATC
CTGATGGAGAATGTCGGACGGGTGCAGACTCGAGACAGTCTTGAATCCAAGCTTTACAGTTGGGGAGAGGAGGTAGCAAG
TAATGCTGTTGAGGTACATGTGCATCATTTACGCAAAAAACTTCCGGAAGGGTTTATCAAAACCATTCGCGGTGTAGGCT
ATCAAATCAGTAATCAATGA

Protein sequence : 
MQILLIEDDLSLAQGLMRSLRHDRFTVNHLSLGRQAINSIKTAAPDIVILDLGLPDMDGTAVLAEIRKVNASLPILVLTA
RGSINDRVIGLDAGADDYLAKPFDIDELLARLRVFERRLSSQQHAALQIGPVSLDNKTMQLKVDDALVELPRREFMLLKI
LMENVGRVQTRDSLESKLYSWGEEVASNAVEVHVHHLRKKLPEGFIKTIRGVGYQISNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7A_1980 YP_006296442.1 two-component system response regulator QseB BAC0487 Protein 2e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7A_1980 YP_006296442.1 two-component system response regulator QseB VFG1390 Protein 6e-32 41
Q7A_1980 YP_006296442.1 two-component system response regulator QseB VFG0473 Protein 4e-38 41