Gene Information

Name : Q7A_1892 (Q7A_1892)
Accession : YP_006296354.1
Strain : Methylophaga sp. JAM1
Genome accession: NC_017857
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.3
Position : 1929293 - 1930813 bp
Length : 1521 bp
Strand : -
Note : PFAM: Aldehyde dehydrogenase family

DNA sequence : 
ATGATTTACGCAAAACCAGGAACACCAGAGTCAGTGATCTCATTTAAACCACGTTATGAAAATTTTATTGGTGGTGAGTG
GATTGCCCCTGTTAAAGGCGAATACTTTAATAACATCACTCCAGTAACCGGCGAAGTAATTTGTGAAATACCTCGCTCAG
GTGAAGCCGATATCGAATTGGCTCTGGATGCCGCACATGCAGCACGTGAGGCATGGGGTAAAACCTCTGTACAGGATCGC
AGTAATATCCTGTTAAAAATTGCAGATCGTATTGAAGCGAATCTTGAAAAACTGGCCGTTGCTGAAACATGGGATAACGG
TAAAGCTGTCCGTGAAACATTGAATGCCGATATTCCTTTAGCAGCTGATCATTTTCGTTATTTCGCTGGTTGCTTGCGTG
CACAGGATGGCACCATGGGTGAAATTGATGAAAATACTGTGGCCTATCATTTCCACGAACCGCTAGGCGTAGTCGGTCAA
ATCATTCCGTGGAACTTCCCATTATTAATGGCAGCATGGAAACTGGCGCCGGCTTTAGCTGCAGGCAACTGCATTGTTAT
GAAACCGGCTGAACAAACACCGGTGTCAATCCTGATTCTTGCAGAATTGATTGCAGACATATTGCCTGCCGGAACATTAA
ATATTGTTAATGGTTTTGGCCGCGAAGCTGGTCAAGCGCTCGGTACTAGCAAACGTATTGCCAAAATTGCATTTACTGGC
TCAACACCTGTTGGCTCGTTGATCATGAAATACGCAGCTGAAAACATTATTCCTTCAACAGTAGAACTGGGCGGTAAATC
ACCAAACGTTTTCTTTGAAGACATCATGCAGCAAGAACAGGATTACATTAATAAATGTGCTGAAGGCATGGTACTGGCGT
TTTTCAACCAGGGTGAAGTTTGTACCTGTCCTTCCCGTGCTGTTATCCAGGAAAGCATCTACGACGAATTCATTGCTGTG
GTCATGGAACGTGCCAAGCTGATCAAGCGTGGTAACCCGCTTGATACCGAAACCCAAGTTGGCGCACAGGCATCACAGGA
GCAGTTCGACAAAATCCTCAGCTATGTTGAAATTGGTAAACAGGAAGGCGCTCAACTGCTAATGGGTGGTGGTGTAGAAC
AATTAGGTCCTGAATTCAATAATGGTTTTTATATCGAACCAACGTTGATGAAAGGCCATAACAAAATGCGTATTTTCCAG
GAAGAAATTTTTGGACCTGTCGTCTCAGTGACCACTTTTAAAGATGAAGCTGAAGCACTGGAAATTGCCAACGACACCGA
ATTTGGTCTGGGCGCCGGTTTATGGACCCGGGATATGAATCTGGCCTATCGTATGGGCCGCGCTATTCAAGCCGGTCGCG
TTTGGACTAACTGCTACCATCATTACCCTGCTCATGCTGCATTTGGTGGTTATAAAAAATCCGGTGTGGGTCGTGAAACC
CATAAAATTGCTCTGGAACACTATCAACAAACCAAAAATCTATTGGTCAGTTACAGCACCAGTCCTCTCGGTTTCTTCTA
A

Protein sequence : 
MIYAKPGTPESVISFKPRYENFIGGEWIAPVKGEYFNNITPVTGEVICEIPRSGEADIELALDAAHAAREAWGKTSVQDR
SNILLKIADRIEANLEKLAVAETWDNGKAVRETLNADIPLAADHFRYFAGCLRAQDGTMGEIDENTVAYHFHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCIVMKPAEQTPVSILILAELIADILPAGTLNIVNGFGREAGQALGTSKRIAKIAFTG
STPVGSLIMKYAAENIIPSTVELGGKSPNVFFEDIMQQEQDYINKCAEGMVLAFFNQGEVCTCPSRAVIQESIYDEFIAV
VMERAKLIKRGNPLDTETQVGAQASQEQFDKILSYVEIGKQEGAQLLMGGGVEQLGPEFNNGFYIEPTLMKGHNKMRIFQ
EEIFGPVVSVTTFKDEAEALEIANDTEFGLGAGLWTRDMNLAYRMGRAIQAGRVWTNCYHHYPAHAAFGGYKKSGVGRET
HKIALEHYQQTKNLLVSYSTSPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-144 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-153 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-153 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-153 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-152 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7A_1892 YP_006296354.1 aldehyde dehydrogenase VFG0082 Protein 1e-144 66