|
Name : Q7A_1667 (Q7A_1667) Accession : YP_006296134.1 Strain : Methylophaga sp. JAM1 Genome accession: NC_017857 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : - COG ID : - EC number : - Position : 1686105 - 1688654 bp Length : 2550 bp Strand : + Note : PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS DNA sequence : ATGACCGAAAAAACCAATCATACGCCAATGATGCAGCAATATCTGCGTATCAAGGCCGAGCATCCCGAATTGTTATTGTT TTATCGAATGGGCGACTTTTATGAGTTGTTTTTTGATGATGCGCATAAAGCTGCCGAGTTATTGGATATTACGCTGACAG CTCGCGGTAATAGTAATGGTGCGCCGATTCCGATGGCGGGTGTTCCTTATCATGCGGCTGAAGGGTATCTGGCCAGATTG CTTAAAGGTGGTGTGGCCGTTGCGATTTGTGAGCAAATTGGTGATCCGGCAACCAGTAAAGGGCCGGTGGAACGTAAAGT TGTACGGGTGCTGACGCCCGGCACCTTAACCGATGAGGCTTTACTCGATAGTAAACAGGAGAATCTACTGGTTGCGATTG CCCGCCATAAGGATCAATACGGTTTAGCCGTGGCCGAAATCAGCAGTGGCCGTTTTGATGTGTGTCAGCATCAATCGTTA ACTGATTTGTTAGCCGATCTAGCCCGATTACAACCTGCAGAAATTCTGATTGATGACAGTCATGGCGACACCTTAAATAG TTATAACAAACAGCTTAAGTATGTGCCGGAGTGGCATTTTGGCCTGGATGCGGCGAGGCGTCGTTTATGTGAGCATTTTG GGACCACCGATTTAAAAGGCTTTGGCTGTGATGATTTGCCGCTAGCCATTATGGCGGCAGGCTGTTTGTTAAATTATGCC CAGCAAACCCATCGCACAGCGCTGCCGCAGTTACGCAAAATCAGTGTTGAAACACCGGCCGACAGTATTCGTATTGATCC ACAATCAAGACGCAATCTGGAGCTGGAGCAAAACCTGTCAGGTGGTTGTGAAAATACCTTATTGTCGGTGCTTGATAATA CCGTTACGCCGATGGGCACACGTTTACTGCGTCGTTGGTTGTTACAACCGAAACGCGATTTAACTACCTTGCAACAGCGT CAGGCGGCGATTGGCAATCTTATTGAACAGGATGTTATTGCTGCCGTTCAAACCCTGTTAAAACCGCTAGGCGATATTGA GCGTATTGTTACCCGCGTAGCACTGAGTAGTGCCAGACCGCGTGACTTTGTGCAGTTACGCCGCATGTTGACTGCTCTGC CAAATTTGCATCAATCTTTATCGGGTACTCAAGCCAGATTGCTGAAACAGATCGACCGCGAGTTGGGGACTTTCCCGGAA TTACTTGAGTTATTGAATAGAGCCATTATTGAAGAGCCGCCAGCGTTGATTCGAGATGGCGGGGTGATTGCCGAAGGCTA TCATGCGGAACTGGATCGGTTACGCAATCTGCATCTGAATGCCAATGATTTTTTACGAAATCTGGAACAGCGTGAACGTG AACGCACTGGTGTCAGTACCTTAAAAGTCGGCTATAACAAAGTGCATGGCTTCTTTATCGAAATCAGCAGAGCCCATAAC ATTGAGTTACCCGCCGATTATCAGCGCCGGCAAACGCTGAAAAATGCTGAGCGCTATATTACTGCCGAGCTGAAAACGCA TGAGGATCAGGTACTCAGTGCCAGTGAAAAAGCATTGGCATTGGAAAAATCATTATACGAAGAGCTTTTTAAACTGATTC ACCCAGAGCTTGCCGCTTTGACCTATTGTGCTGCGGCACTGGCAGAACTTGATGTTTTGACCAATCTGTCTGAGCGGGCG CAAACGCTTAATTATGTCGCGCCGCAGTTGACTGCTGAGCAGAGCTTATCGATTCAGGCGGGCAGACATCCGGTTGTCGA AGCAGTGCAGAAAACGCATTTCTGTCCCAATGATTTGCAGTTAACTGAACAGTCGATGCTGGTGATTACCGGGCCGAATA TGGGCGGTAAATCTACCTATATGCGGCAGACAGCATTAATTGCGATCATGGCGTATATGGGCAGCTATGTTCCTGCTGAT TCGGCAGTTATCGGCCCGATTGATCAGATATTTACCCGCATTGGTGCCAGTGATGATTTGGCGTCAGGACGCTCTACTTT TATGGTGGAGATGAATGAAGCAGCAAATATACTGAATAATGCTTCCGCTCAAAGTCTGGTGTTAATGGATGAAGTAGGGC GGGGCACCAGTACCTTTGATGGCTTGGCGCTGGCCTGGAGCTGCGCCGAAAAACTGGTGCGGGATATTGGTGCGTATACC TTATTTGCTACGCATTATTTTGAAATGACTCAGTTGCCAGGATTATATGACAAAGCCTGTAATGTGCATCTTGATGCGAT TGAGCATGGCGACAAGATTGTGTTTTTGCATCAATTAAAACCGGGTGCGGCCAATCAGAGTTACGGTTTACAGGTGGCGC AGCTGGCAGGGGTGCCAAACGATGTGATTCAGGCGGCGAAACATAAATTAGCTGCTTTGGAAACTCAACGTACCGTTGGT ACAAATTTGCATGAACAACCGCCGCAACATGATTTATTTGCTCAACCGGATAATTCGGCCTTGATAAACAAAATCGAGCA AATCAATCCTGATGAATTAACGCCCAAAGCGGCGCTGGAATTACTTTACGAGCTGAAAAAACTTATCTGA Protein sequence : MTEKTNHTPMMQQYLRIKAEHPELLLFYRMGDFYELFFDDAHKAAELLDITLTARGNSNGAPIPMAGVPYHAAEGYLARL LKGGVAVAICEQIGDPATSKGPVERKVVRVLTPGTLTDEALLDSKQENLLVAIARHKDQYGLAVAEISSGRFDVCQHQSL TDLLADLARLQPAEILIDDSHGDTLNSYNKQLKYVPEWHFGLDAARRRLCEHFGTTDLKGFGCDDLPLAIMAAGCLLNYA QQTHRTALPQLRKISVETPADSIRIDPQSRRNLELEQNLSGGCENTLLSVLDNTVTPMGTRLLRRWLLQPKRDLTTLQQR QAAIGNLIEQDVIAAVQTLLKPLGDIERIVTRVALSSARPRDFVQLRRMLTALPNLHQSLSGTQARLLKQIDRELGTFPE LLELLNRAIIEEPPALIRDGGVIAEGYHAELDRLRNLHLNANDFLRNLEQRERERTGVSTLKVGYNKVHGFFIEISRAHN IELPADYQRRQTLKNAERYITAELKTHEDQVLSASEKALALEKSLYEELFKLIHPELAALTYCAAALAELDVLTNLSERA QTLNYVAPQLTAEQSLSIQAGRHPVVEAVQKTHFCPNDLQLTEQSMLVITGPNMGGKSTYMRQTALIAIMAYMGSYVPAD SAVIGPIDQIFTRIGASDDLASGRSTFMVEMNEAANILNNASAQSLVLMDEVGRGTSTFDGLALAWSCAEKLVRDIGAYT LFATHYFEMTQLPGLYDKACNVHLDAIEHGDKIVFLHQLKPGAANQSYGLQVAQLAGVPNDVIQAAKHKLAALETQRTVG TNLHEQPPQHDLFAQPDNSALINKIEQINPDELTPKAALELLYELKKLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Q7A_1667 | YP_006296134.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 58 |
