Gene Information

Name : Q7A_1641 (Q7A_1641)
Accession : YP_006296110.1
Strain : Methylophaga sp. JAM1
Genome accession: NC_017857
Putative virulence/resistance : Virulence
Product : secretion system X protein GspG-like 3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1662324 - 1662794 bp
Length : 471 bp
Strand : +
Note : PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain

DNA sequence :
ATGTCAGAACATTTATTTTTCAGCAGAAGTACAGCTTTTTCTGGCCCAACTGCAAAGACTCAACAAGGTTTTACGTTGCT
CGAATTGCTGGTGGTCATGGTCATTATTGGCTTATTGGCGGGTTACGTCGGGCCGAAATATTTTGCTCAAATTGGTAAAT
CCGAAGTGAAAACCGCCAAAGCGCAAATTGAAGCGCTGGGCAAAGCCTTGGATCAATATCGGTTGGATGTAGGGCATTAC
CCAAGTACAGAACAAGGTCTGGCTGCGTTAAATACGCCACCGGGCAATGAACGAAAATGGCAGGGGCCATACTTGAAAAA
AGCTGTCCCCAATGACCCTTGGGATAATCCGTATCACTACCAGATGCCGGGTGCTCATGGTCAATATGATGATTATGATT
TGTGGTCGTTAGGCAGTGATGGTGCCAGCGGCGGAAAGGATACAGCTGCCGATATCGTGAGCTGGCAGTAG

Protein sequence :
MSEHLFFSRSTAFSGPTAKTQQGFTLLELLVVMVIIGLLAGYVGPKYFAQIGKSEVKTAKAQIEALGKALDQYRLDVGHY
PSTEQGLAALNTPPGNERKWQGPYLKKAVPNDPWDNPYHYQMPGAHGQYDDYDLWSLGSDGASGGKDTAADIVSWQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-25 46
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-25 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7A_1641 YP_006296110.1 secretion system X protein GspG-like 3 VFG0180 Protein 4e-25 47
Q7A_1641 YP_006296110.1 secretion system X protein GspG-like 3 VFG2050 Protein 1e-25 46