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Name : Q7A_1548 (Q7A_1548) Accession : YP_006296019.1 Strain : Methylophaga sp. JAM1 Genome accession: NC_017857 Putative virulence/resistance : Virulence Product : type IV fimbrial assembly, ATPase PilB Function : - COG functional category : - COG ID : - EC number : - Position : 1559196 - 1560863 bp Length : 1668 bp Strand : + Note : PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain DNA sequence : ATGGCATTGACTGACGACATGCTATTGCAGGCCGGTGTGGCAACCGAATTACTCGATGGGGAAACCGTCGAGCGATTGAA AGTGGAAGCCCGTCGCCAACATGTGCCTGTATTAAGCAAGGTACTGGCATATTACCGCATACCGGTTTCGGCTTTGCACC GTGCCGTTGCGGAATCGCGTCAACTCCCGTTTATTGATCTCACTCAGGCCACTATCGAACGGAAATTATCAAAAAAACTG CCTGGCAGTCTGATTAAGCGTAAACATTTTTTACCGCTAGAGATTGAAGAAAATCTGGTGCTGGTCACGGCTGACCCCGA TGATATGGCGGGTATCGCCTCGGCCATGCGTTTGCTGGGGACTGAACTGCCTGTGGTCATGGCTGAACCCAGACGGCTAC AGTTAATGGTAGACGAATATGTGGCCACCAGCATCATGGCGGCGGCTGAAGAAACGACTACCGGACCGCGTGAGACAGAT CTGGTAGCACTGCTGGACACCATTTTGATGGAAGCATATCTCACCCGCGCGTCGGATGTGCATTTACTGACAGAAGAGGA TGGGCTCCGGGTTCGACTTCGGATCGATGGCAGTCTGTCGGATTATCCCTTGGCTGCCGAGCAGAATGTGGCTTCTGGTC TGGTATCACGGATAAAAGTGTTGGCGGGGCTGGATATTGCCGAACAGCGTCAACCGCAGGATGGCGGTTTTAGTTATCAT CTGGCCGCACCGTTTGATCTGGATTTCAATATCCGGGTGGCGACCGCACCGACCCGTTTGGGTGAACGCATCACCATGCG TCTGCTGGGGCAGGAATCCGGTGGCCTGACACTGACTGACTTGGGCATGCTGGAGCAGGATCTGGCGAGTTTTAATCAAG CCATACGGAACCCTTACGGCATGATTCTGCTGACCGGTCCGACAGGAAGCGGTAAATCGACCACTTTGTTTGCTGCATTA CAGGAAATCAACAAACCCGATATTAATATCATGACGGTAGAAAACCCGATTGAGTATGTGATGGATGGGGTTTCGCAGAT CCAGACCGGCCCCAAGATCACTTTTGCCGATGCATTACGTTCATTATTGAGGCATGACCCGGATGTGTTGATGGTCGGAG AAATCCGTGATGCCGAAACAGCAGATGTGGCTGTCAAAGCAGCGATGACCGGTCATCTGGTCTTTTCCACCTTGCATACC AACAATGCCGTCAGTGCCGTCACCCGGCTGATTGATATTGGCTGTGAACCTTTTTTGATTGGCTCGACCATGACCGCGGT GATTGCCCAGCGACTGGTCAGGCGTCTGTGCCGACATTGTGCTCGCAAACGGTCTGCGACTGAAACCGAATGTACAACAC TGGGTTATGAAGGGAAATCTATCGAGATTTTTGATCCGGTGGGCTGTGCGGTCTGTCAGGGAACCGGTTTTCGTGGTCGT TTGGGCTTATTTGAAACGCTCTGGTTTGATGAACAACTGGCGCGAATGGTGGCTAAAGGCGCTGATGAAGAAACGCTGGA ACACGCCGCCGGAGACAAGTTGCGTTTCATGTGGCAGGACGGTTGTGAAAAAGTGCTGCGCGGAATGACTACCCTGGAAG AAATACAGAAAGTGGCCGTAGTAAAGCATATTGCTGGCAATGAGGTAATCTACGATGCCGCTGTATAG Protein sequence : MALTDDMLLQAGVATELLDGETVERLKVEARRQHVPVLSKVLAYYRIPVSALHRAVAESRQLPFIDLTQATIERKLSKKL PGSLIKRKHFLPLEIEENLVLVTADPDDMAGIASAMRLLGTELPVVMAEPRRLQLMVDEYVATSIMAAAEETTTGPRETD LVALLDTILMEAYLTRASDVHLLTEEDGLRVRLRIDGSLSDYPLAAEQNVASGLVSRIKVLAGLDIAEQRQPQDGGFSYH LAAPFDLDFNIRVATAPTRLGERITMRLLGQESGGLTLTDLGMLEQDLASFNQAIRNPYGMILLTGPTGSGKSTTLFAAL QEINKPDINIMTVENPIEYVMDGVSQIQTGPKITFADALRSLLRHDPDVLMVGEIRDAETADVAVKAAMTGHLVFSTLHT NNAVSAVTRLIDIGCEPFLIGSTMTAVIAQRLVRRLCRHCARKRSATETECTTLGYEGKSIEIFDPVGCAVCQGTGFRGR LGLFETLWFDEQLARMVAKGADEETLEHAAGDKLRFMWQDGCEKVLRGMTTLEEIQKVAVVKHIAGNEVIYDAAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-75 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-75 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Q7A_1548 | YP_006296019.1 | type IV fimbrial assembly, ATPase PilB | VFG0182 | Protein | 4e-79 | 46 |
| Q7A_1548 | YP_006296019.1 | type IV fimbrial assembly, ATPase PilB | VFG2048 | Protein | 4e-77 | 44 |
| Q7A_1548 | YP_006296019.1 | type IV fimbrial assembly, ATPase PilB | VFG1876 | Protein | 3e-75 | 43 |
| Q7A_1548 | YP_006296019.1 | type IV fimbrial assembly, ATPase PilB | VFG2426 | Protein | 2e-61 | 42 |
